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| | ==Human telomere DNA quadruplex structure in K+ solution hybrid-2 form== | | ==Human telomere DNA quadruplex structure in K+ solution hybrid-2 form== |
| - | <StructureSection load='2jpz' size='340' side='right' caption='[[2jpz]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''> | + | <StructureSection load='2jpz' size='340' side='right'caption='[[2jpz]]' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[2jpz]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JPZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JPZ FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2jpz]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JPZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JPZ FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2hy9|2hy9]], [[2kka|2kka]]</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jpz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jpz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2jpz RCSB], [http://www.ebi.ac.uk/pdbsum/2jpz PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jpz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jpz OCA], [https://pdbe.org/2jpz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jpz RCSB], [https://www.ebi.ac.uk/pdbsum/2jpz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jpz ProSAT]</span></td></tr> |
| - | <table>
| + | </table> |
| - | <div style="background-color:#fffaf0;">
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| - | == Publication Abstract from PubMed ==
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| - | Formation of the G-quadruplex in the human telomeric sequence can inhibit the activity of telomerase, thus the intramolecular telomeric G-quadruplexes have been considered as an attractive anticancer target. Information of intramolecular telomeric G-quadruplex structures formed under physiological conditions is important for structure-based drug design. Here, we report the first structure of the major intramolecular G-quadruplex formed in a native, non-modified human telomeric sequence in K(+) solution. This is a hybrid-type mixed parallel/antiparallel-G-stranded G-quadruplex, one end of which is covered by a novel T:A:T triple capping structure. This structure (Hybrid-2) and the previously reported Hybrid-1 structure differ in their loop arrangements, strand orientations and capping structures. The distinct capping structures appear to be crucial for the favored formation of the specific hybrid-type intramolecular telomeric G-quadruplexes, and may provide specific binding sites for drug targeting. Our study also shows that while the hybrid-type G-quadruplexes appear to be the major conformations in K(+) solution, human telomeric sequences are always in equilibrium between Hybrid-1 and Hybrid-2 structures, which is largely determined by the 3'-flanking sequence. Furthermore, both hybrid-type G-quadruplexes suggest a straightforward means for multimer formation with effective packing in the human telomeric sequence and provide important implications for drug targeting of G-quadruplexes in human telomeres.
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| - | Structure of the Hybrid-2 type intramolecular human telomeric G-quadruplex in K+ solution: insights into structure polymorphism of the human telomeric sequence.,Dai J, Carver M, Punchihewa C, Jones RA, Yang D Nucleic Acids Res. 2007;35(15):4927-40. Epub 2007 Jul 10. PMID:17626043<ref>PMID:17626043</ref>
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| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
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| - | </div> | + | |
| - | == References ==
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| - | <references/> | + | |
| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Carver, M.]] | + | [[Category: Large Structures]] |
| - | [[Category: Dai, J.]] | + | [[Category: Carver M]] |
| - | [[Category: Jones, R.]] | + | [[Category: Dai J]] |
| - | [[Category: Punchihewa, C.]] | + | [[Category: Jones R]] |
| - | [[Category: Yang, D.]] | + | [[Category: Punchihewa C]] |
| - | [[Category: Dna]]
| + | [[Category: Yang D]] |
| - | [[Category: Human telomeric sequence]]
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| - | [[Category: Quadruplex]]
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