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2z3b
From Proteopedia
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==Crystal Structure of Bacillus Subtilis CodW, a non-canonical HslV-like peptidase with an impaired catalytic apparatus== | ==Crystal Structure of Bacillus Subtilis CodW, a non-canonical HslV-like peptidase with an impaired catalytic apparatus== | ||
| - | <StructureSection load='2z3b' size='340' side='right' caption='[[2z3b]], [[Resolution|resolution]] 2.50Å' scene=''> | + | <StructureSection load='2z3b' size='340' side='right'caption='[[2z3b]], [[Resolution|resolution]] 2.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2z3b]] is a 12 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2z3b]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z3B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z3B FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> |
| - | <tr><td class="sblockLbl"><b>[[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z3b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z3b OCA], [https://pdbe.org/2z3b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z3b RCSB], [https://www.ebi.ac.uk/pdbsum/2z3b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z3b ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/CLPQ_BACSU CLPQ_BACSU] Protease subunit of a proteasome-like degradation complex.<ref>PMID:11179218</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z3/2z3b_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z3/2z3b_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2z3b ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Bacillus subtilis]] | [[Category: Bacillus subtilis]] | ||
| - | [[Category: Chung | + | [[Category: Large Structures]] |
| - | [[Category: Eom | + | [[Category: Chung CH]] |
| - | [[Category: Kang | + | [[Category: Eom SH]] |
| - | [[Category: Kang | + | [[Category: Kang GB]] |
| - | [[Category: Lim | + | [[Category: Kang MS]] |
| - | [[Category: Lim | + | [[Category: Lim BK]] |
| - | [[Category: Park | + | [[Category: Lim YJ]] |
| - | [[Category: Rho | + | [[Category: Park HH]] |
| - | [[Category: Seong | + | [[Category: Rho SH]] |
| - | [[Category: Wang | + | [[Category: Seong IS]] |
| - | + | [[Category: Wang J]] | |
| - | + | ||
Current revision
Crystal Structure of Bacillus Subtilis CodW, a non-canonical HslV-like peptidase with an impaired catalytic apparatus
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Categories: Bacillus subtilis | Large Structures | Chung CH | Eom SH | Kang GB | Kang MS | Lim BK | Lim YJ | Park HH | Rho SH | Seong IS | Wang J
