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2zzj
From Proteopedia
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==Crystal structure of endo-beta-1,4-glucuronan lyase from fungus Trichoderma reesei== | ==Crystal structure of endo-beta-1,4-glucuronan lyase from fungus Trichoderma reesei== | ||
| - | <StructureSection load='2zzj' size='340' side='right' caption='[[2zzj]], [[Resolution|resolution]] 1.80Å' scene=''> | + | <StructureSection load='2zzj' size='340' side='right'caption='[[2zzj]], [[Resolution|resolution]] 1.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2zzj]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2zzj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_13631 Atcc 13631]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZZJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZZJ FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">glA ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">glA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=51453 ATCC 13631])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Glucuronan_lyase Glucuronan lyase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.2.14 4.2.2.14] </span></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zzj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zzj OCA], [https://pdbe.org/2zzj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zzj RCSB], [https://www.ebi.ac.uk/pdbsum/2zzj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zzj ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zz/2zzj_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zz/2zzj_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zzj ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 2zzj" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Atcc 13631]] | ||
[[Category: Glucuronan lyase]] | [[Category: Glucuronan lyase]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Fushinobu, S | + | [[Category: Fushinobu, S]] |
| - | [[Category: Habu, N | + | [[Category: Habu, N]] |
| - | [[Category: Igarashi, K | + | [[Category: Igarashi, K]] |
| - | [[Category: Ishida, T | + | [[Category: Ishida, T]] |
| - | [[Category: Isogai, A | + | [[Category: Isogai, A]] |
| - | [[Category: Konno, N | + | [[Category: Konno, N]] |
| - | [[Category: Samejima, M | + | [[Category: Samejima, M]] |
[[Category: Beta-jelly roll]] | [[Category: Beta-jelly roll]] | ||
[[Category: Lyase]] | [[Category: Lyase]] | ||
Current revision
Crystal structure of endo-beta-1,4-glucuronan lyase from fungus Trichoderma reesei
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Categories: Atcc 13631 | Glucuronan lyase | Large Structures | Fushinobu, S | Habu, N | Igarashi, K | Ishida, T | Isogai, A | Konno, N | Samejima, M | Beta-jelly roll | Lyase
