User:Angel Herraez/Sandbox 7
From Proteopedia
< User:Angel Herraez(Difference between revisions)
(New page: ==Your Heading Here (maybe something like 'Structure')== <table> <tr> <td> This is a default text for your page <ref>PMID:21638687</ref> to the rescue. </td> <td> more text </td> </tr> <...) |
|||
(63 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
- | == | + | == Testing proposals for ligand focus == |
+ | <StructureSection load='1hho' size='400' side='right' caption='initial display of hemoglobin' scene=''> | ||
- | + | This is 1hho.pdb. The initial display is hemoglobin tetramer (biological assembly), but all green links will start with a fresh reload of the dimer (asymmetric unit). | |
- | + | ||
- | + | ||
- | This is a | + | |
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | == | + | This is what the current green link for a ligand does: <scene name='60/601886/Ligand_current/1'>HEM</scene>. Highlights all the ligands with the same group name and focuses on their collective center. |
- | < | + | |
+ | Proposals: | ||
+ | |||
+ | A) Highlight only one ligand, <scene name='60/601886/Ligand_a/1'>HEM</scene> | ||
+ | |||
+ | A2) Same with rotate best: <scene name='60/601886/Ligand_a2/1'>HEM</scene> | ||
+ | |||
+ | B) Highlight all, but focus on one <scene name='60/601886/Ligand_b/1'>HEM</scene> | ||
+ | |||
+ | B2) Same with rotate best: <scene name='60/601886/Ligand_b2/1'>HEM</scene> | ||
+ | |||
+ | Scripts are at [[Proteopedia_talk:Development]] | ||
+ | |||
+ | Note: the scenes have custom captions, but they are not being displayed --something to fix. | ||
+ | |||
+ | <scene name='60/601886/Focus_heme-2/1'>prueba 3</scene> | ||
+ | |||
+ | <i class="fas fa-power-off"></i> ⏻ ⏶⏷ | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script> </script> | ||
+ | <text> <i class="fas fa-power-off"></i>quality </text> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
+ | |||
+ | Ligand in pocket, inital animation and then spinning: | ||
+ | <scene name='60/601886/Bolsillo_girando/1'>version 1</scene> | ||
+ | <scene name='60/601886/Bolsillo_girando/2'>version 2</scene> | ||
+ | |||
+ | </StructureSection> |
Current revision
Testing proposals for ligand focus
|