User:Angel Herraez/Sandbox 8

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Current revision (20:11, 30 September 2019) (edit) (undo)
(tests for tags of the JmolExtension)
 
(12 intermediate revisions not shown.)
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==Your Heading Here (maybe something like 'Structure')==
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== Test the extension ==
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<StructureSection load='2bna' size='350' side='right' caption='sample DNA structure (PDB entry [[2bna]])' scene=''>
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Anything in this section will appear adjacent to the 3D structure and will be scrollable.
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...This uses the inlineContents tag:
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<jmol>
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<size>220</size>
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<color>#EEEEFF</color>
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<jmolApplet>
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<inlineContents>
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Menthol
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OpenBabel02151916433D
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31 31 0 0 0 0 0 0 0 0999 V2000
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0.6797 1.2651 -0.2387 C 0 0 0 0 0 0 0 0 0 0 0 0
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1.3944 -0.0096 0.2024 C 0 0 0 0 0 0 0 0 0 0 0 0
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0.6695 -1.3027 -0.2371 C 0 0 2 0 0 0 0 0 0 0 0 0
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-0.8129 -1.2397 0.2137 C 0 0 1 0 0 0 0 0 0 0 0 0
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-1.5089 0.0539 -0.2208 C 0 0 0 0 0 0 0 0 0 0 0 0
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-0.7680 1.3033 0.2480 C 0 0 2 0 0 0 0 0 0 0 0 0
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-1.4711 2.5652 -0.2509 C 0 0 0 0 0 0 0 0 0 0 0 0
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-1.5752 -2.3115 -0.3340 O 0 0 0 0 0 0 0 0 0 0 0 0
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1.4325 -2.5688 0.2868 C 0 0 0 0 0 0 0 0 0 0 0 0
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0.7873 -3.8964 -0.1292 C 0 0 0 0 0 0 0 0 0 0 0 0
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2.8961 -2.5942 -0.1835 C 0 0 0 0 0 0 0 0 0 0 0 0
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1.2254 2.1343 0.1484 H 0 0 0 0 0 0 0 0 0 0 0 0
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0.7117 1.3341 -1.3336 H 0 0 0 0 0 0 0 0 0 0 0 0
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2.4050 0.0252 -0.2178 H 0 0 0 0 0 0 0 0 0 0 0 0
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1.5013 -0.0027 1.2947 H 0 0 0 0 0 0 0 0 0 0 0 0
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-1.6086 0.0630 -1.3151 H 0 0 0 0 0 0 0 0 0 0 0 0
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-2.5371 0.0569 0.1639 H 0 0 0 0 0 0 0 0 0 0 0 0
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0.6850 -1.3476 -1.3355 H 0 0 0 0 0 0 0 0 0 0 0 0
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-0.8654 -1.3281 1.3056 H 0 0 0 0 0 0 0 0 0 0 0 0
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-0.7714 1.3230 1.3457 H 0 0 0 0 0 0 0 0 0 0 0 0
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-1.4921 2.6034 -1.3455 H 0 0 0 0 0 0 0 0 0 0 0 0
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-0.9581 3.4631 0.1088 H 0 0 0 0 0 0 0 0 0 0 0 0
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-2.5048 2.6021 0.1085 H 0 0 0 0 0 0 0 0 0 0 0 0
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-1.4957 -2.2720 -1.3025 H 0 0 0 0 0 0 0 0 0 0 0 0
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1.4411 -2.5381 1.3844 H 0 0 0 0 0 0 0 0 0 0 0 0
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0.5863 -3.9212 -1.2054 H 0 0 0 0 0 0 0 0 0 0 0 0
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-0.1467 -4.0734 0.4111 H 0 0 0 0 0 0 0 0 0 0 0 0
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1.4390 -4.7445 0.1088 H 0 0 0 0 0 0 0 0 0 0 0 0
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2.9614 -2.5170 -1.2741 H 0 0 0 0 0 0 0 0 0 0 0 0
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3.3900 -3.5247 0.1184 H 0 0 0 0 0 0 0 0 0 0 0 0
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3.4778 -1.7803 0.2581 H 0 0 0 0 0 0 0 0 0 0 0 0
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1 2 1 0 0 0 0
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1 12 1 0 0 0 0
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1 13 1 0 0 0 0
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2 3 1 0 0 0 0
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2 14 1 0 0 0 0
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2 15 1 0 0 0 0
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3 4 1 1 0 0 0
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3 9 1 0 0 0 0
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3 18 1 0 0 0 0
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4 5 1 0 0 0 0
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4 8 1 0 0 0 0
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4 19 1 1 0 0 0
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5 6 1 0 0 0 0
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5 16 1 0 0 0 0
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5 17 1 0 0 0 0
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6 1 1 0 0 0 0
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6 7 1 0 0 0 0
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6 20 1 1 0 0 0
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7 21 1 0 0 0 0
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7 22 1 0 0 0 0
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7 23 1 0 0 0 0
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8 24 1 0 0 0 0
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9 10 1 0 0 0 0
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9 11 1 0 0 0 0
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9 25 1 0 0 0 0
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10 26 1 0 0 0 0
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10 27 1 0 0 0 0
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10 28 1 0 0 0 0
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11 29 1 0 0 0 0
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11 30 1 0 0 0 0
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11 31 1 0 0 0 0
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M END
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</inlineContents>
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</jmolApplet>
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</jmol>
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...end
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<scene name='60/601887/Trace1/1'>trace</scene>
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...This uses the wikiPageContents tag:
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<jmol>
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<size>220</size>
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<color>#EEEEFF</color>
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<jmolApplet>
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<wikiPageContents>Menthol</wikiPageContents>
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</jmolApplet>
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</jmol>
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...end
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<scene name='60/601887/Heme_surface/2'>Surface for ligand / ligands</scene>
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...This uses the uploadedFileContents tag:
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<jmol>
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</StructureSection>
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<size>220</size>
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<color>#EEEEFF</color>
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<jmolApplet>
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== References ==
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<uploadedFileContents>Menthol.mol</uploadedFileContents>
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<references/>
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</jmolApplet>
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</jmol>
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...end

Current revision

Test the extension

...This uses the inlineContents tag:

Drag the structure with the mouse to rotate

...end

...This uses the wikiPageContents tag:

Drag the structure with the mouse to rotate

...end

...This uses the uploadedFileContents tag:

Drag the structure with the mouse to rotate

...end

Proteopedia Page Contributors and Editors (what is this?)

Angel Herraez

Retrieved from "http://52.214.119.220/wiki/index.php/User:Angel_Herraez/Sandbox_8"
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