3bjh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:18, 5 August 2020) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Soft-SAD crystal structure of a pheromone binding protein from the honeybee Apis mellifera L.==
==Soft-SAD crystal structure of a pheromone binding protein from the honeybee Apis mellifera L.==
-
<StructureSection load='3bjh' size='340' side='right' caption='[[3bjh]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
+
<StructureSection load='3bjh' size='340' side='right'caption='[[3bjh]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3bjh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Apis_mellifera Apis mellifera]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1r5r 1r5r]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BJH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BJH FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3bjh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Apis_mellifera Apis mellifera]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1r5r 1r5r]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BJH OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3BJH FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NBB:N-BUTYL-BENZENESULFONAMIDE'>NBB</scene><br>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NBB:N-BUTYL-BENZENESULFONAMIDE'>NBB</scene></td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3bfa|3bfa]], [[3bfb|3bfb]], [[3bfh|3bfh]], [[2h8v|2h8v]]</td></tr>
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3bfa|3bfa]], [[3bfb|3bfb]], [[3bfh|3bfh]], [[2h8v|2h8v]]</td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bjh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bjh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3bjh RCSB], [http://www.ebi.ac.uk/pdbsum/3bjh PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3bjh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bjh OCA], [http://pdbe.org/3bjh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3bjh RCSB], [http://www.ebi.ac.uk/pdbsum/3bjh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3bjh ProSAT]</span></td></tr>
-
<table>
+
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bj/3bjh_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bj/3bjh_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bjh ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 25: Line 26:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3bjh" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Pheromone binding protein|Pheromone binding protein]]
== References ==
== References ==
<references/>
<references/>
Line 30: Line 35:
</StructureSection>
</StructureSection>
[[Category: Apis mellifera]]
[[Category: Apis mellifera]]
-
[[Category: Bezirard, V.]]
+
[[Category: Large Structures]]
-
[[Category: Blon, F.]]
+
[[Category: Bezirard, V]]
-
[[Category: Briand, L.]]
+
[[Category: Blon, F]]
-
[[Category: Cambillau, C.]]
+
[[Category: Briand, L]]
-
[[Category: Gruez, A.]]
+
[[Category: Cambillau, C]]
-
[[Category: Lartigue, A.]]
+
[[Category: Gruez, A]]
-
[[Category: Pernollet, J C.]]
+
[[Category: Lartigue, A]]
-
[[Category: Tegoni, M.]]
+
[[Category: Pernollet, J C]]
-
[[Category: Walsh, M.]]
+
[[Category: Tegoni, M]]
-
[[Category: Apis mellifera]]
+
[[Category: Walsh, M]]
[[Category: Honeybee]]
[[Category: Honeybee]]
[[Category: Pheromone binding protein]]
[[Category: Pheromone binding protein]]
[[Category: Signal transduction]]
[[Category: Signal transduction]]

Current revision

Soft-SAD crystal structure of a pheromone binding protein from the honeybee Apis mellifera L.

PDB ID 3bjh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools