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3bdu
From Proteopedia
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==Crystal structure of protein Q6D8G1 at the resolution 1.9 A. Northeast Structural Genomics Consortium target EwR22A.== | ==Crystal structure of protein Q6D8G1 at the resolution 1.9 A. Northeast Structural Genomics Consortium target EwR22A.== | ||
| - | <StructureSection load='3bdu' size='340' side='right' caption='[[3bdu]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='3bdu' size='340' side='right'caption='[[3bdu]], [[Resolution|resolution]] 1.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3bdu]] is a 7 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3bdu]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Erwinia_carotovora_subsp._atroseptica Erwinia carotovora subsp. atroseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BDU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BDU FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ECA1013 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ECA1013 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=218491 Erwinia carotovora subsp. atroseptica])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bdu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bdu OCA], [https://pdbe.org/3bdu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bdu RCSB], [https://www.ebi.ac.uk/pdbsum/3bdu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bdu ProSAT], [https://www.topsan.org/Proteins/NESGC/3bdu TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bd/3bdu_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bd/3bdu_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bdu ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Erwinia carotovora subsp. atroseptica]] |
| - | [[Category: Acton, T B | + | [[Category: Large Structures]] |
| - | [[Category: Baran, M C | + | [[Category: Acton, T B]] |
| - | [[Category: Cunningham, K | + | [[Category: Baran, M C]] |
| - | [[Category: Fang, Y | + | [[Category: Cunningham, K]] |
| - | [[Category: Hunt, J F | + | [[Category: Fang, Y]] |
| - | [[Category: Kuzin, A P | + | [[Category: Hunt, J F]] |
| - | [[Category: Liu, J | + | [[Category: Kuzin, A P]] |
| - | [[Category: Montelione, G T | + | [[Category: Liu, J]] |
| - | [[Category: | + | [[Category: Montelione, G T]] |
| - | [[Category: Owens, L | + | [[Category: Structural genomic]] |
| - | [[Category: Rost, B | + | [[Category: Owens, L]] |
| - | [[Category: Seetharaman, J | + | [[Category: Rost, B]] |
| - | [[Category: Su, M | + | [[Category: Seetharaman, J]] |
| - | [[Category: Tong, L | + | [[Category: Su, M]] |
| - | [[Category: Wang, D | + | [[Category: Tong, L]] |
| - | [[Category: Xiao, R | + | [[Category: Wang, D]] |
| + | [[Category: Xiao, R]] | ||
[[Category: Lipoprotein]] | [[Category: Lipoprotein]] | ||
[[Category: Nesg]] | [[Category: Nesg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
[[Category: Q6d8g1]] | [[Category: Q6d8g1]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: X_ray]] | [[Category: X_ray]] | ||
Current revision
Crystal structure of protein Q6D8G1 at the resolution 1.9 A. Northeast Structural Genomics Consortium target EwR22A.
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Categories: Erwinia carotovora subsp. atroseptica | Large Structures | Acton, T B | Baran, M C | Cunningham, K | Fang, Y | Hunt, J F | Kuzin, A P | Liu, J | Montelione, G T | Structural genomic | Owens, L | Rost, B | Seetharaman, J | Su, M | Tong, L | Wang, D | Xiao, R | Lipoprotein | Nesg | PSI, Protein structure initiative | Q6d8g1 | X ray
