This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3cax
From Proteopedia
(Difference between revisions)
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of uncharacterized protein PF0695== | ==Crystal structure of uncharacterized protein PF0695== | ||
| - | <StructureSection load='3cax' size='340' side='right' caption='[[3cax]], [[Resolution|resolution]] 2.43Å' scene=''> | + | <StructureSection load='3cax' size='340' side='right'caption='[[3cax]], [[Resolution|resolution]] 2.43Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3cax]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3cax]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CAX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CAX FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.43Å</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cax OCA], [https://pdbe.org/3cax PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cax RCSB], [https://www.ebi.ac.uk/pdbsum/3cax PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cax ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3cax TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q8U2Y3_PYRFU Q8U2Y3_PYRFU] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ca/3cax_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ca/3cax_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cax ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Pyrococcus furiosus | + | [[Category: Large Structures]] |
| - | [[Category: Almo | + | [[Category: Pyrococcus furiosus DSM 3638]] |
| - | [[Category: Bain | + | [[Category: Almo SC]] |
| - | [[Category: Burley | + | [[Category: Bain K]] |
| - | [[Category: Gilmore | + | [[Category: Burley SK]] |
| - | [[Category: Hu | + | [[Category: Gilmore M]] |
| - | [[Category: Meyer | + | [[Category: Hu S]] |
| - | + | [[Category: Meyer AJ]] | |
| - | [[Category: Ramagopal | + | [[Category: Ramagopal UA]] |
| - | [[Category: Rodgers | + | [[Category: Rodgers L]] |
| - | [[Category: Sauder | + | [[Category: Sauder JM]] |
| - | [[Category: Toro | + | [[Category: Toro R]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of uncharacterized protein PF0695
| |||||||||||
Categories: Large Structures | Pyrococcus furiosus DSM 3638 | Almo SC | Bain K | Burley SK | Gilmore M | Hu S | Meyer AJ | Ramagopal UA | Rodgers L | Sauder JM | Toro R
