This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2kh1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:51, 20 December 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==2-Hydroxy-7-nitrofluorene covalently linked into a 13mer DNA duplex - solution structure of the face-up orientation==
==2-Hydroxy-7-nitrofluorene covalently linked into a 13mer DNA duplex - solution structure of the face-up orientation==
-
<StructureSection load='2kh1' size='340' side='right' caption='[[2kh1]], [[NMR_Ensembles_of_Models | 11 NMR models]]' scene=''>
+
<StructureSection load='2kh1' size='340' side='right'caption='[[2kh1]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2kh1]] is a 2 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KH1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KH1 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2kh1]] is a 2 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KH1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KH1 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HNF:7-NITRO-9H-FLUOREN-2-OL'>HNF</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=3DR:1,2-DIDEOXYRIBOFURANOSE-5-PHOSPHATE'>3DR</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3DR:1,2-DIDEOXYRIBOFURANOSE-5-PHOSPHATE'>3DR</scene>, <scene name='pdbligand=HNF:7-NITRO-9H-FLUOREN-2-OL'>HNF</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2kgz|2kgz]], [[2kh0|2kh0]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kh1 OCA], [https://pdbe.org/2kh1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kh1 RCSB], [https://www.ebi.ac.uk/pdbsum/2kh1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kh1 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kh1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kh1 RCSB], [http://www.ebi.ac.uk/pdbsum/2kh1 PDBsum]</span></td></tr>
+
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 16: Line 16:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 2kh1" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Dallmann, A.]]
+
[[Category: Large Structures]]
-
[[Category: Ernsting, N P.]]
+
[[Category: Dallmann A]]
-
[[Category: Kovalenko, S A.]]
+
[[Category: Ernsting NP]]
-
[[Category: Mahrwald, R.]]
+
[[Category: Kovalenko SA]]
-
[[Category: Muegge, C.]]
+
[[Category: Mahrwald R]]
-
[[Category: Pfaffe, M.]]
+
[[Category: Muegge C]]
-
[[Category: Base pair mimic]]
+
[[Category: Pfaffe M]]
-
[[Category: Conformational flexibility]]
+
-
[[Category: Dna]]
+
-
[[Category: Solution structure]]
+

Current revision

2-Hydroxy-7-nitrofluorene covalently linked into a 13mer DNA duplex - solution structure of the face-up orientation

PDB ID 2kh1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools