This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1jo0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:41, 7 February 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1jo0.jpg|left|200px]]
 
-
{{Structure
+
==Structure of HI1333, a Hypothetical Protein from Haemophilus influenzae with Structural Similarity to RNA-binding Proteins==
-
|PDB= 1jo0 |SIZE=350|CAPTION= <scene name='initialview01'>1jo0</scene>, resolution 1.37&Aring;
+
<StructureSection load='1jo0' size='340' side='right'caption='[[1jo0]], [[Resolution|resolution]] 1.37&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
+
<table><tr><td colspan='2'>[[1jo0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JO0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JO0 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.37&#8491;</td></tr>
-
|GENE= HI1333 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=727 Haemophilus influenzae])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jo0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jo0 OCA], [https://pdbe.org/1jo0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jo0 RCSB], [https://www.ebi.ac.uk/pdbsum/1jo0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jo0 ProSAT]</span></td></tr>
-
 
+
</table>
-
'''Structure of HI1333, a Hypothetical Protein from Haemophilus influenzae with Structural Similarity to RNA-binding Proteins'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Y1333_HAEIN Y1333_HAEIN]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1JO0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JO0 OCA].
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==Reference==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jo/1jo0_consurf.spt"</scriptWhenChecked>
-
Structure of HI1333 (YhbY), a putative RNA-binding protein from Haemophilus influenzae., Willis MA, Krajewski W, Chalamasetty VR, Reddy P, Howard A, Herzberg O, Proteins. 2002 Nov 15;49(3):423-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12360533 12360533]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jo0 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Haemophilus influenzae]]
[[Category: Haemophilus influenzae]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Chalamasetty, V R.]]
+
[[Category: Chalamasetty VR]]
-
[[Category: Herzberg, O.]]
+
[[Category: Herzberg O]]
-
[[Category: Howard, A.]]
+
[[Category: Howard A]]
-
[[Category: Krajewski, W.]]
+
[[Category: Krajewski W]]
-
[[Category: Reddy, P.]]
+
[[Category: Reddy P]]
-
[[Category: S2F, Structure 2.Function Project.]]
+
[[Category: Willis MA]]
-
[[Category: Willis, M A.]]
+
-
[[Category: GOL]]
+
-
[[Category: hi1333]]
+
-
[[Category: hypothetical protein]]
+
-
[[Category: s2f]]
+
-
[[Category: structural genomic]]
+
-
[[Category: structure 2 function project]]
+
-
[[Category: yhby_haein]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 12:05:59 2008''
+

Current revision

Structure of HI1333, a Hypothetical Protein from Haemophilus influenzae with Structural Similarity to RNA-binding Proteins

PDB ID 1jo0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1jo0"
Personal tools