4d4i

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'''Unreleased structure'''
 
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The entry 4d4i is ON HOLD
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==Understanding bi-specificity of A-domains==
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<StructureSection load='4d4i' size='340' side='right'caption='[[4d4i]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4d4i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Planktothrix_agardhii Planktothrix agardhii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D4I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4D4I FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=ARG:ARGININE'>ARG</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4d4i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d4i OCA], [https://pdbe.org/4d4i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4d4i RCSB], [https://www.ebi.ac.uk/pdbsum/4d4i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4d4i ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/G0WVH3_PLARU G0WVH3_PLARU]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Many biologically active peptide secondary metabolites of bacteria are produced by modular enzyme complexes, the non-ribosomal peptide synthetases. Substrate selection occurs through an adenylation (A) domain, which activates the cognate amino acid with high fidelity. The recently discovered A domain of an Anabaenopeptin synthetase from Planktothrix agardhii (ApnA A1 ) is capable of activating two chemically distinct amino acids (Arg and Tyr). Crystal structures of the A domain reveal how both substrates fit into to binding pocket of the enzyme. Analysis of the binding pocket led to the identification of three residues that are critical for substrate recognition. Systematic mutagenesis of these residues created A domains that were monospecific, or changed the substrate specificity to tryptophan. The non-natural amino acid 4-azidophenylalanine is also efficiently activated by a mutant A domain, thus enabling the production of diversified non-ribosomal peptides for bioorthogonal labeling.
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Authors: Kaljunen, H., Schiefelbein, S.H.H., Stummer, D., Kozak, S., Meijers, R., Christiansen, G., Rentmeister, A.
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Structural Elucidation of the Bispecificity of A Domains as a Basis for Activating Non-natural Amino Acids.,Kaljunen H, Schiefelbein SH, Stummer D, Kozak S, Meijers R, Christiansen G, Rentmeister A Angew Chem Int Ed Engl. 2015 Jun 11. doi: 10.1002/anie.201503275. PMID:26096082<ref>PMID:26096082</ref>
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Description: Understanding bi-specificity of A-domains
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4d4i" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Planktothrix agardhii]]
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[[Category: Christiansen G]]
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[[Category: Kaljunen H]]
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[[Category: Kozak S]]
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[[Category: Meijers R]]
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[[Category: Rentmeister A]]
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[[Category: Schiefelbein SHH]]
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[[Category: Stummer D]]

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Understanding bi-specificity of A-domains

PDB ID 4d4i

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