4pnj
From Proteopedia
(Difference between revisions)
(6 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
+ | |||
==Recombinant Sperm Whale P6 Myoglobin Solved with Single Pulse Free Electron Laser Data== | ==Recombinant Sperm Whale P6 Myoglobin Solved with Single Pulse Free Electron Laser Data== | ||
- | <StructureSection load='4pnj' size='340' side='right' caption='[[4pnj]], [[Resolution|resolution]] 1.36Å' scene=''> | + | <StructureSection load='4pnj' size='340' side='right'caption='[[4pnj]], [[Resolution|resolution]] 1.36Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[4pnj]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PNJ OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[4pnj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PNJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PNJ FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.36Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pnj OCA], [https://pdbe.org/4pnj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pnj RCSB], [https://www.ebi.ac.uk/pdbsum/4pnj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pnj ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/MYG_PHYMC MYG_PHYMC] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles. | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The emerging method of femtosecond crystallography (FX) may extend the diffraction resolution accessible from small radiation-sensitive crystals and provides a means to determine catalytically accurate structures of acutely radiation-sensitive metalloenzymes. Automated goniometer-based instrumentation developed for use at the Linac Coherent Light Source enabled efficient and flexible FX experiments to be performed on a variety of sample types. In the case of rod-shaped Cpl hydrogenase crystals, only five crystals and about 30 min of beam time were used to obtain the 125 still diffraction patterns used to produce a 1.6-A resolution electron density map. For smaller crystals, high-density grids were used to increase sample throughput; 930 myoglobin crystals mounted at random orientation inside 32 grids were exposed, demonstrating the utility of this approach. Screening results from cryocooled crystals of beta2-adrenoreceptor and an RNA polymerase II complex indicate the potential to extend the diffraction resolution obtainable from very radiation-sensitive samples beyond that possible with undulator-based synchrotron sources. | ||
+ | |||
+ | Goniometer-based femtosecond crystallography with X-ray free electron lasers.,Cohen AE, Soltis SM, Gonzalez A, Aguila L, Alonso-Mori R, Barnes CO, Baxter EL, Brehmer W, Brewster AS, Brunger AT, Calero G, Chang JF, Chollet M, Ehrensberger P, Eriksson TL, Feng Y, Hattne J, Hedman B, Hollenbeck M, Holton JM, Keable S, Kobilka BK, Kovaleva EG, Kruse AC, Lemke HT, Lin G, Lyubimov AY, Manglik A, Mathews II, McPhillips SE, Nelson S, Peters JW, Sauter NK, Smith CA, Song J, Stevenson HP, Tsai Y, Uervirojnangkoorn M, Vinetsky V, Wakatsuki S, Weis WI, Zadvornyy OA, Zeldin OB, Zhu D, Hodgson KO Proc Natl Acad Sci U S A. 2014 Oct 31. pii: 201418733. PMID:25362050<ref>PMID:25362050</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 4pnj" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Myoglobin 3D structures|Myoglobin 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Brunger | + | [[Category: Large Structures]] |
- | [[Category: Cohen | + | [[Category: Physeter catodon]] |
- | [[Category: Gonzalez | + | [[Category: Brunger A]] |
- | [[Category: Lam | + | [[Category: Cohen A]] |
- | [[Category: Lyubimov | + | [[Category: Gonzalez A]] |
- | [[Category: Sauter | + | [[Category: Lam W]] |
- | [[Category: Soltis | + | [[Category: Lyubimov A]] |
- | [[Category: Tsai | + | [[Category: Sauter N]] |
- | [[Category: Uervirojnangkoorn | + | [[Category: Soltis M]] |
- | + | [[Category: Tsai Y]] | |
- | + | [[Category: Uervirojnangkoorn M]] | |
- | + |
Current revision
Recombinant Sperm Whale P6 Myoglobin Solved with Single Pulse Free Electron Laser Data
|
Categories: Large Structures | Physeter catodon | Brunger A | Cohen A | Gonzalez A | Lam W | Lyubimov A | Sauter N | Soltis M | Tsai Y | Uervirojnangkoorn M