2r5x

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:20, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of uncharacterized conserved protein YugN from Geobacillus kaustophilus HTA426==
==Crystal structure of uncharacterized conserved protein YugN from Geobacillus kaustophilus HTA426==
-
<StructureSection load='2r5x' size='340' side='right' caption='[[2r5x]], [[Resolution|resolution]] 2.04&Aring;' scene=''>
+
<StructureSection load='2r5x' size='340' side='right'caption='[[2r5x]], [[Resolution|resolution]] 2.04&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2r5x]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus_hta426 Geobacillus kaustophilus hta426]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R5X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2R5X FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2r5x]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus_HTA426 Geobacillus kaustophilus HTA426]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R5X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R5X FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yugN, GK1089 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=235909 Geobacillus kaustophilus HTA426])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.04&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2r5x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r5x OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2r5x RCSB], [http://www.ebi.ac.uk/pdbsum/2r5x PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2r5x TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r5x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r5x OCA], [https://pdbe.org/2r5x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r5x RCSB], [https://www.ebi.ac.uk/pdbsum/2r5x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r5x ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2r5x TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5L106_GEOKA Q5L106_GEOKA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r5/2r5x_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r5/2r5x_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r5x ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Geobacillus kaustophilus hta426]]
+
[[Category: Geobacillus kaustophilus HTA426]]
-
[[Category: Shi, W]]
+
[[Category: Large Structures]]
 +
[[Category: Almo SC]]
 +
[[Category: Burley SK]]
 +
[[Category: Freeman J]]
 +
[[Category: Groshong C]]
 +
[[Category: Koss J]]
 +
[[Category: Meyer AJ]]
 +
[[Category: Patskovsky Y]]
 +
[[Category: Ramagopal UA]]
 +
[[Category: Rodgers L]]
 +
[[Category: Sauder JM]]
 +
[[Category: Shi W]]
 +
[[Category: Toro R]]
 +
[[Category: Wasserman S]]
 +
[[Category: Wu B]]

Current revision

Crystal structure of uncharacterized conserved protein YugN from Geobacillus kaustophilus HTA426

PDB ID 2r5x

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools