3grz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:56, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==CRYSTAL STRUCTURE OF ribosomal protein L11 methylase FROM Lactobacillus delbrueckii subsp. bulgaricus==
==CRYSTAL STRUCTURE OF ribosomal protein L11 methylase FROM Lactobacillus delbrueckii subsp. bulgaricus==
-
<StructureSection load='3grz' size='340' side='right' caption='[[3grz]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='3grz' size='340' side='right'caption='[[3grz]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3grz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_delbrueckii_subsp._bulgaricus_atcc_baa-365 Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GRZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3grz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GRZ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">prmA, LBUL_0809 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3grz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3grz RCSB], [http://www.ebi.ac.uk/pdbsum/3grz PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3grz TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3grz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grz OCA], [https://pdbe.org/3grz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3grz RCSB], [https://www.ebi.ac.uk/pdbsum/3grz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3grz ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3grz TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PRMA_LACDB PRMA_LACDB] Methylates ribosomal protein L11 (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gr/3grz_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gr/3grz_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3grz ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
Line 22: Line 25:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365]]
+
[[Category: Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365]]
-
[[Category: Methylase]]
+
[[Category: Large Structures]]
-
[[Category: Sam-binding domain]]
+
[[Category: Almo SC]]
 +
[[Category: Burley SK]]
 +
[[Category: Chang S]]
 +
[[Category: Freeman J]]
 +
[[Category: Morano C]]
 +
[[Category: Patskovsky Y]]
 +
[[Category: Ramagopal UA]]
 +
[[Category: Sauder JM]]
 +
[[Category: Toro R]]

Current revision

CRYSTAL STRUCTURE OF ribosomal protein L11 methylase FROM Lactobacillus delbrueckii subsp. bulgaricus

PDB ID 3grz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools