3by5

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==Crystal structure of cobalamin biosynthesis protein chiG from Agrobacterium tumefaciens str. C58==
==Crystal structure of cobalamin biosynthesis protein chiG from Agrobacterium tumefaciens str. C58==
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<StructureSection load='3by5' size='340' side='right' caption='[[3by5]], [[Resolution|resolution]] 2.52&Aring;' scene=''>
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<StructureSection load='3by5' size='340' side='right'caption='[[3by5]], [[Resolution|resolution]] 2.52&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3by5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BY5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BY5 FirstGlance]. <br>
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BY5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BY5 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.52&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">chiG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 Agrobacterium tumefaciens str. C58])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3by5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3by5 OCA], [https://pdbe.org/3by5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3by5 RCSB], [https://www.ebi.ac.uk/pdbsum/3by5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3by5 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3by5 TOPSAN]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3by5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3by5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3by5 RCSB], [http://www.ebi.ac.uk/pdbsum/3by5 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3by5 TOPSAN]</span></td></tr>
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</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/by/3by5_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/by/3by5_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3by5 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Agrobacterium tumefaciens str. c58]]
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[[Category: Large Structures]]
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[[Category: Almo, S C]]
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[[Category: Almo SC]]
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[[Category: Bonanno, J B]]
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[[Category: Bonanno JB]]
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[[Category: Burley, S K]]
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[[Category: Burley SK]]
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[[Category: Iizuka, M]]
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[[Category: Iizuka M]]
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[[Category: Maletic, M]]
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[[Category: Maletic M]]
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[[Category: Structural genomic]]
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[[Category: Patskovsky Y]]
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[[Category: Patskovsky, Y]]
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[[Category: Rutter M]]
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[[Category: Rutter, M]]
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[[Category: Sauder JM]]
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[[Category: Sauder, J M]]
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[[Category: Sojitra S]]
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[[Category: Sojitra, S]]
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[[Category: Wasserman SR]]
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[[Category: Wasserman, S R]]
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[[Category: Biosynthetic protein]]
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[[Category: Cobalamin biosynthesis protein]]
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[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Uncharacterized protein]]
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[[Category: Unknown function]]
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Current revision

Crystal structure of cobalamin biosynthesis protein chiG from Agrobacterium tumefaciens str. C58

PDB ID 3by5

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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