3nf5

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==Crystal structure of the C-terminal domain of nuclear pore complex component NUP116 from Candida glabrata==
==Crystal structure of the C-terminal domain of nuclear pore complex component NUP116 from Candida glabrata==
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<StructureSection load='3nf5' size='340' side='right' caption='[[3nf5]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
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<StructureSection load='3nf5' size='340' side='right'caption='[[3nf5]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3nf5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Candida_glabrata Candida glabrata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NF5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NF5 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3nf5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Candida_glabrata Candida glabrata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NF5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NF5 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CAGL0F06171g, NUP116 (gi50287617) ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5478 Candida glabrata])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nf5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nf5 OCA], [https://pdbe.org/3nf5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nf5 RCSB], [https://www.ebi.ac.uk/pdbsum/3nf5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nf5 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nf5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nf5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nf5 RCSB], [http://www.ebi.ac.uk/pdbsum/3nf5 PDBsum]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q6FU56_CANGA Q6FU56_CANGA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nf/3nf5_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nf/3nf5_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nf5 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 3nf5" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
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*[[Nucleoporin|Nucleoporin]]
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*[[Nucleoporin 3D structures|Nucleoporin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Candida glabrata]]
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[[Category: Large Structures]]
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[[Category: Atwell, S]]
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[[Category: Atwell S]]
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[[Category: Bain, K]]
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[[Category: Bain K]]
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[[Category: Burley, S K]]
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[[Category: Burley SK]]
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[[Category: Emtage, J S]]
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[[Category: Emtage JS]]
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[[Category: Gheyi, T]]
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[[Category: Gheyi T]]
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[[Category: Gilmore, J]]
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[[Category: Gilmore J]]
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[[Category: Manglicmot, D]]
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[[Category: Manglicmot D]]
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[[Category: Structural genomic]]
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[[Category: Rout M]]
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[[Category: Rout, M]]
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[[Category: Sali A]]
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[[Category: Sali, A]]
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[[Category: Sampathkumar P]]
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[[Category: Sampathkumar, P]]
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[[Category: Sauder JM]]
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[[Category: Sauder, J M]]
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[[Category: Thompson DA]]
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[[Category: Thompson, D A]]
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[[Category: Wasserman S]]
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[[Category: Wasserman, S]]
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[[Category: Glebs domain]]
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[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
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[[Category: Nuclear pore complex]]
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[[Category: Nup116]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Protein transport]]
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Current revision

Crystal structure of the C-terminal domain of nuclear pore complex component NUP116 from Candida glabrata

PDB ID 3nf5

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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