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3esm
From Proteopedia
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==Crystal structure of an uncharacterized protein from Nocardia farcinica reveals an immunoglobulin-like fold== | ==Crystal structure of an uncharacterized protein from Nocardia farcinica reveals an immunoglobulin-like fold== | ||
| - | <StructureSection load='3esm' size='340' side='right' caption='[[3esm]], [[Resolution|resolution]] 1.65Å' scene=''> | + | <StructureSection load='3esm' size='340' side='right'caption='[[3esm]], [[Resolution|resolution]] 1.65Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3esm]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3esm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nocardia_farcinica Nocardia farcinica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ESM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ESM FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=SNN:L-3-AMINOSUCCINIMIDE'>SNN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3esm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3esm OCA], [https://pdbe.org/3esm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3esm RCSB], [https://www.ebi.ac.uk/pdbsum/3esm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3esm ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3esm TOPSAN]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q5Z3N8_NOCFA Q5Z3N8_NOCFA] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/es/3esm_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/es/3esm_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3esm ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Nocardia farcinica]] | [[Category: Nocardia farcinica]] | ||
| - | [[Category: Almo | + | [[Category: Almo SC]] |
| - | [[Category: Bain | + | [[Category: Bain KT]] |
| - | [[Category: Bonanno | + | [[Category: Bonanno JB]] |
| - | [[Category: Burley | + | [[Category: Burley SK]] |
| - | [[Category: Freeman | + | [[Category: Freeman J]] |
| - | [[Category: Hu | + | [[Category: Hu S]] |
| - | + | [[Category: Romero R]] | |
| - | [[Category: Romero | + | [[Category: Sauder JM]] |
| - | [[Category: Sauder | + | [[Category: Wasserman S]] |
| - | [[Category: Wasserman | + | |
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| - | + | ||
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Current revision
Crystal structure of an uncharacterized protein from Nocardia farcinica reveals an immunoglobulin-like fold
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Categories: Large Structures | Nocardia farcinica | Almo SC | Bain KT | Bonanno JB | Burley SK | Freeman J | Hu S | Romero R | Sauder JM | Wasserman S
