3dqp
From Proteopedia
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==Crystal structure of the oxidoreductase ylbE from Lactococcus lactis, Northeast Structural Genomics Consortium Target KR121.== | ==Crystal structure of the oxidoreductase ylbE from Lactococcus lactis, Northeast Structural Genomics Consortium Target KR121.== | ||
| - | <StructureSection load='3dqp' size='340' side='right' caption='[[3dqp]], [[Resolution|resolution]] 1.40Å' scene=''> | + | <StructureSection load='3dqp' size='340' side='right'caption='[[3dqp]], [[Resolution|resolution]] 1.40Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3dqp]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3dqp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_lactis_subsp._lactis Lactococcus lactis subsp. lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DQP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DQP FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dqp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dqp OCA], [https://pdbe.org/3dqp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dqp RCSB], [https://www.ebi.ac.uk/pdbsum/3dqp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dqp ProSAT], [https://www.topsan.org/Proteins/NESGC/3dqp TOPSAN]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q9CGI7_LACLA Q9CGI7_LACLA] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dq/3dqp_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dq/3dqp_consurf.spt"</scriptWhenChecked> |
| - | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dqp ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Lactococcus lactis subsp. lactis]] | [[Category: Lactococcus lactis subsp. lactis]] | ||
| - | [[Category: Acton | + | [[Category: Large Structures]] |
| - | [[Category: Ciccosanti | + | [[Category: Acton TB]] |
| - | [[Category: Everett | + | [[Category: Ciccosanti C]] |
| - | [[Category: Foote | + | [[Category: Everett JK]] |
| - | [[Category: Forouhar | + | [[Category: Foote EL]] |
| - | [[Category: Hunt | + | [[Category: Forouhar F]] |
| - | [[Category: Lee | + | [[Category: Hunt JF]] |
| - | [[Category: Mao | + | [[Category: Lee D]] |
| - | [[Category: Montelione | + | [[Category: Mao L]] |
| - | + | [[Category: Montelione GT]] | |
| - | [[Category: Neely | + | [[Category: Neely H]] |
| - | [[Category: Seetharaman | + | [[Category: Seetharaman J]] |
| - | [[Category: Tong | + | [[Category: Tong L]] |
| - | [[Category: Xiao | + | [[Category: Xiao R]] |
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Current revision
Crystal structure of the oxidoreductase ylbE from Lactococcus lactis, Northeast Structural Genomics Consortium Target KR121.
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Categories: Lactococcus lactis subsp. lactis | Large Structures | Acton TB | Ciccosanti C | Everett JK | Foote EL | Forouhar F | Hunt JF | Lee D | Mao L | Montelione GT | Neely H | Seetharaman J | Tong L | Xiao R
