3ahd

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==Phosphoketolase from Bifidobacterium Breve complexed with 2-acetyl-thiamine diphosphate==
==Phosphoketolase from Bifidobacterium Breve complexed with 2-acetyl-thiamine diphosphate==
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<StructureSection load='3ahd' size='340' side='right' caption='[[3ahd]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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<StructureSection load='3ahd' size='340' side='right'caption='[[3ahd]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3ahd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bifidobacterium_breve Bifidobacterium breve]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AHD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AHD FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3ahd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bifidobacterium_breve Bifidobacterium breve]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AHD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AHD FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HTL:2-ACETYL-THIAMINE+DIPHOSPHATE'>HTL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ahc|3ahc]], [[3ahe|3ahe]], [[3ahf|3ahf]], [[3ahg|3ahg]], [[3ahh|3ahh]], [[3ahi|3ahi]], [[3ahj|3ahj]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HTL:2-ACETYL-THIAMINE+DIPHOSPHATE'>HTL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">xfp ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1685 Bifidobacterium breve])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ahd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ahd OCA], [https://pdbe.org/3ahd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ahd RCSB], [https://www.ebi.ac.uk/pdbsum/3ahd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ahd ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Fructose-6-phosphate_phosphoketolase Fructose-6-phosphate phosphoketolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.22 4.1.2.22] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ahd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ahd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ahd RCSB], [http://www.ebi.ac.uk/pdbsum/3ahd PDBsum]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/D6PAH1_BIFBR D6PAH1_BIFBR]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ah/3ahd_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ah/3ahd_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ahd ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 3ahd" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Bifidobacterium breve]]
[[Category: Bifidobacterium breve]]
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[[Category: Fructose-6-phosphate phosphoketolase]]
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[[Category: Large Structures]]
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[[Category: Ashida, H]]
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[[Category: Ashida H]]
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[[Category: Fushinobu, S]]
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[[Category: Fushinobu S]]
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[[Category: Katayama, T]]
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[[Category: Katayama T]]
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[[Category: Kim, B J]]
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[[Category: Kim B-J]]
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[[Category: Shoun, H]]
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[[Category: Shoun H]]
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[[Category: Suzuki, R]]
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[[Category: Suzuki R]]
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[[Category: Wakagi, T]]
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[[Category: Wakagi T]]
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[[Category: Yamamoto, K]]
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[[Category: Yamamoto K]]
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[[Category: Acetyl thiamine diphosphate]]
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[[Category: Alpha-beta fold]]
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[[Category: Homodimer]]
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[[Category: Lyase]]
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[[Category: Thiamine diphosphate-dependent enzyme]]
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Current revision

Phosphoketolase from Bifidobacterium Breve complexed with 2-acetyl-thiamine diphosphate

PDB ID 3ahd

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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