4r83

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==Crystal structure of Sialyltransferase from Photobacterium damsela==
==Crystal structure of Sialyltransferase from Photobacterium damsela==
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<StructureSection load='4r83' size='340' side='right' caption='[[4r83]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
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<StructureSection load='4r83' size='340' side='right'caption='[[4r83]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4r83]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R83 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4R83 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4r83]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Photobacterium_damselae Photobacterium damselae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R83 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4R83 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4r84|4r84]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-galactoside_alpha-2,6-sialyltransferase Beta-galactoside alpha-2,6-sialyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.99.1 2.4.99.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4r83 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r83 OCA], [https://pdbe.org/4r83 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4r83 RCSB], [https://www.ebi.ac.uk/pdbsum/4r83 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4r83 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4r83 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r83 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4r83 RCSB], [http://www.ebi.ac.uk/pdbsum/4r83 PDBsum]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/O66375_9GAMM O66375_9GAMM]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Sialyltransferase structures fall into either GT-A or GT-B glycosyltransferase fold. Some sialyltransferases from the Photobacterium genus have been shown to contain an additional N-terminal immunoglobulin (Ig)-like domain. Photobacterium damselae alpha2-6-sialyltransferase has been used efficiently in enzymatic and chemoenzymatic synthesis of alpha2-6-linked sialosides. Here we report three crystal structures of this enzyme. Two structures with and without a donor substrate analog CMP-3F(a)Neu5Ac contain an immunoglobulin (Ig)-like domain and adopt the GT-B sialyltransferase fold. The binary structure reveals a non-productive pre-Michaelis complex, which are caused by crystal lattice contacts that prevent the large conformational changes. The third structure lacks the Ig-domain. Comparison of the three structures reveals small inherent flexibility between the two Rossmann-like domains of the GT-B fold.
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Crystal structures of sialyltransferase from Photobacterium damselae.,Huynh N, Li Y, Yu H, Huang S, Lau K, Chen X, Fisher AJ FEBS Lett. 2014 Dec 20;588(24):4720-9. doi: 10.1016/j.febslet.2014.11.003. Epub, 2014 Nov 15. PMID:25451227<ref>PMID:25451227</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4r83" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Sialyltransferase 3D structures|Sialyltransferase 3D structures]]
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Beta-galactoside alpha-2,6-sialyltransferase]]
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[[Category: Large Structures]]
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[[Category: Chen, X]]
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[[Category: Photobacterium damselae]]
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[[Category: Fisher, A J]]
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[[Category: Chen X]]
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[[Category: Huynh, N]]
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[[Category: Fisher AJ]]
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[[Category: Li, Y]]
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[[Category: Huynh N]]
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[[Category: Glycosyltransferase gt-b structural group]]
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[[Category: Li Y]]
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[[Category: Rossmann fold]]
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[[Category: Transferase]]
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Current revision

Crystal structure of Sialyltransferase from Photobacterium damsela

PDB ID 4r83

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