3hlu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:58, 6 November 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal Structure of Uncharacterized Protein Conserved in Bacteria DUF2179 from Eubacterium ventriosum==
==Crystal Structure of Uncharacterized Protein Conserved in Bacteria DUF2179 from Eubacterium ventriosum==
-
<StructureSection load='3hlu' size='340' side='right' caption='[[3hlu]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
+
<StructureSection load='3hlu' size='340' side='right'caption='[[3hlu]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3hlu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Eubacterium_ventriosum Eubacterium ventriosum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HLU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HLU FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3hlu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Eubacterium_ventriosum_ATCC_27560 Eubacterium ventriosum ATCC 27560]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HLU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HLU FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.65&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">EUBVEN_01903 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=39496 Eubacterium ventriosum])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hlu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hlu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3hlu RCSB], [http://www.ebi.ac.uk/pdbsum/3hlu PDBsum], [http://www.topsan.org/Proteins/MCSG/3hlu TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hlu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hlu OCA], [https://pdbe.org/3hlu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hlu RCSB], [https://www.ebi.ac.uk/pdbsum/3hlu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hlu ProSAT], [https://www.topsan.org/Proteins/MCSG/3hlu TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A5Z863_9FIRM A5Z863_9FIRM]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hl/3hlu_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hl/3hlu_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hlu ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Eubacterium ventriosum]]
+
[[Category: Eubacterium ventriosum ATCC 27560]]
-
[[Category: Joachimiak, A]]
+
[[Category: Large Structures]]
-
[[Category: Keigher, L]]
+
[[Category: Joachimiak A]]
-
[[Category: Kim, Y]]
+
[[Category: Keigher L]]
-
[[Category: Li, H]]
+
[[Category: Kim Y]]
-
[[Category: Structural genomic]]
+
[[Category: Li H]]
-
[[Category: Alpha-beta half sandwich]]
+
-
[[Category: Mcsg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal Structure of Uncharacterized Protein Conserved in Bacteria DUF2179 from Eubacterium ventriosum

PDB ID 3hlu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools