3s7x
From Proteopedia
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==Unassembled Washington University Polyomavirus VP1 Pentamer R198K Mutant== | ==Unassembled Washington University Polyomavirus VP1 Pentamer R198K Mutant== | ||
- | <StructureSection load='3s7x' size='340' side='right' caption='[[3s7x]], [[Resolution|resolution]] 2.90Å' scene=''> | + | <StructureSection load='3s7x' size='340' side='right'caption='[[3s7x]], [[Resolution|resolution]] 2.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3s7x]] is a 5 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3s7x]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/WU_Polyomavirus WU Polyomavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S7X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3S7X FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
- | < | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3s7x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3s7x OCA], [https://pdbe.org/3s7x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3s7x RCSB], [https://www.ebi.ac.uk/pdbsum/3s7x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3s7x ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/VP1_POVWU VP1_POVWU] Forms an icosahedral capsid with a T=7 symmetry and a 40 nm diameter. The capsid is composed of 72 pentamers linked to each other by disulfide bonds and associated with VP2 or VP3 proteins. Interacts with sialic acids on the cell surface to provide virion attachment to target cell. Once attached, the virion is internalized by endocytosis and traffics to the endoplasmic reticulum. Inside the endoplasmic reticulum, the protein folding machinery isomerizes VP1 interpentamer disulfide bonds, thereby triggering initial uncoating. Next, the virion uses the endoplasmic reticulum-associated degradation machinery to probably translocate in the cytosol before reaching the nucleus. Nuclear entry of the viral DNA involves the selective exposure and importin recognition of VP2/Vp3 nuclear localization signal. In late phase of infection, neo-synthesized VP1 encapsulates replicated genomic DNA in the nucleus, and participates in rearranging nucleosomes around the viral DNA (By similarity). | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
+ | <div class="pdbe-citations 3s7x" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
- | *[[Virus coat | + | *[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: WU Polyomavirus]] |
- | [[Category: | + | [[Category: Neu U]] |
- | [[Category: | + | [[Category: Stehle T]] |
- | [[Category: | + | [[Category: Wang J]] |
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Current revision
Unassembled Washington University Polyomavirus VP1 Pentamer R198K Mutant
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