This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3o73

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:29, 6 September 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of quinone reductase 2 in complex with the indolequinone MAC627==
==Crystal structure of quinone reductase 2 in complex with the indolequinone MAC627==
-
<StructureSection load='3o73' size='340' side='right' caption='[[3o73]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='3o73' size='340' side='right'caption='[[3o73]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3o73]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O73 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3O73 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3o73]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O73 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3O73 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=O73:5-[(4-AMINOBUTYL)AMINO]-1,2-DIMETHYL-3-[(4-NITROPHENOXY)METHYL]-1H-INDOLE-4,7-DIONE'>O73</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1qr2|1qr2]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=O73:5-[(4-AMINOBUTYL)AMINO]-1,2-DIMETHYL-3-[(4-NITROPHENOXY)METHYL]-1H-INDOLE-4,7-DIONE'>O73</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NQO2, NMOR2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3o73 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o73 OCA], [https://pdbe.org/3o73 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3o73 RCSB], [https://www.ebi.ac.uk/pdbsum/3o73 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3o73 ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribosyldihydronicotinamide_dehydrogenase_(quinone) Ribosyldihydronicotinamide dehydrogenase (quinone)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.99.2 1.10.99.2] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3o73 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o73 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3o73 RCSB], [http://www.ebi.ac.uk/pdbsum/3o73 PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/NQO2_HUMAN NQO2_HUMAN] The enzyme apparently serves as a quinone reductase in connection with conjugation reactions of hydroquinones involved in detoxification pathways as well as in biosynthetic processes such as the vitamin K-dependent gamma-carboxylation of glutamate residues in prothrombin synthesis.<ref>PMID:18254726</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 17: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3o73" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
Line 25: Line 27:
</StructureSection>
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Colucci, M A]]
+
[[Category: Large Structures]]
-
[[Category: Dufour, M]]
+
[[Category: Colucci MA]]
-
[[Category: Li, Y]]
+
[[Category: De Matteis CI]]
-
[[Category: Matteis, C I.De]]
+
[[Category: Dufour M]]
-
[[Category: Moody, C J]]
+
[[Category: Li Y]]
-
[[Category: Ross, D]]
+
[[Category: Moody CJ]]
-
[[Category: Siegel, D]]
+
[[Category: Ross D]]
-
[[Category: Yan, C]]
+
[[Category: Siegel D]]
-
[[Category: Fad]]
+
[[Category: Yan C]]
-
[[Category: Flavoprotein]]
+
-
[[Category: Indolequinone mac627]]
+
-
[[Category: Nqo2]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Oxidoreductase-oxidoreductase inhibitor complex]]
+
-
[[Category: Quinone reductase 2]]
+

Current revision

Crystal structure of quinone reductase 2 in complex with the indolequinone MAC627

PDB ID 3o73

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools