This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3qlm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:14, 1 November 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of porcine pancreatic phospholipase A2 in complex with n-hexadecanoic acid==
==Crystal structure of porcine pancreatic phospholipase A2 in complex with n-hexadecanoic acid==
-
<StructureSection load='3qlm' size='340' side='right' caption='[[3qlm]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+
<StructureSection load='3qlm' size='340' side='right'caption='[[3qlm]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3qlm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QLM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QLM FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3qlm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QLM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QLM FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3o4m|3o4m]], [[3hsw|3hsw]], [[3l30|3l30]], [[3l69|3l69]], [[2b00|2b00]], [[2b01|2b01]], [[2b04|2b04]], [[2b03|2b03]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phospholipase_A(2) Phospholipase A(2)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.4 3.1.1.4] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qlm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qlm OCA], [https://pdbe.org/3qlm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qlm RCSB], [https://www.ebi.ac.uk/pdbsum/3qlm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qlm ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qlm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qlm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3qlm RCSB], [http://www.ebi.ac.uk/pdbsum/3qlm PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PA21B_PIG PA21B_PIG] PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3qlm" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Phospholipase A2|Phospholipase A2]]
+
*[[Phospholipase A2 3D structures|Phospholipase A2 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
-
[[Category: Aparna, V]]
+
[[Category: Aparna V]]
-
[[Category: Dileep, K V]]
+
[[Category: Dileep KV]]
-
[[Category: Haridas, M]]
+
[[Category: Haridas M]]
-
[[Category: Karthe, P]]
+
[[Category: Karthe P]]
-
[[Category: Mandal, P K]]
+
[[Category: Mandal PK]]
-
[[Category: Sadasivan, C]]
+
[[Category: Sadasivan C]]
-
[[Category: Hydrolase]]
+
-
[[Category: Palmitic acid binding]]
+
-
[[Category: Pancreatic enzyme]]
+
-
[[Category: Pla2]]
+

Current revision

Crystal structure of porcine pancreatic phospholipase A2 in complex with n-hexadecanoic acid

PDB ID 3qlm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools