This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3phz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:54, 6 September 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal Structure Analysis of Polyporus squamosus lectin bound to human-type influenza-binding epitope Neu5Aca2-6Galb1-4GlcNAc==
==Crystal Structure Analysis of Polyporus squamosus lectin bound to human-type influenza-binding epitope Neu5Aca2-6Galb1-4GlcNAc==
-
<StructureSection load='3phz' size='340' side='right' caption='[[3phz]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+
<StructureSection load='3phz' size='340' side='right'caption='[[3phz]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3phz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Polyporus_squamosus Polyporus squamosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PHZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PHZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3phz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cerioporus_squamosus Cerioporus squamosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PHZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PHZ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">psl1a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5640 Polyporus squamosus])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PRD_900046:6-sialyl-N-acetyllactosamine'>PRD_900046</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3phz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3phz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3phz RCSB], [http://www.ebi.ac.uk/pdbsum/3phz PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3phz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3phz OCA], [https://pdbe.org/3phz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3phz RCSB], [https://www.ebi.ac.uk/pdbsum/3phz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3phz ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q75WT9_9APHY Q75WT9_9APHY]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 15: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3phz" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Ricin|Ricin]]
+
*[[Ricin 3D structures|Ricin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Polyporus squamosus]]
+
[[Category: Cerioporus squamosus]]
-
[[Category: Kadirvelraj, R]]
+
[[Category: Large Structures]]
-
[[Category: Woods, R J]]
+
[[Category: Kadirvelraj R]]
-
[[Category: 6-sialyl-lactosamine]]
+
[[Category: Woods RJ]]
-
[[Category: Beta trefoil]]
+
-
[[Category: Saccharide binding lectin]]
+
-
[[Category: Sugar binding protein]]
+

Current revision

Crystal Structure Analysis of Polyporus squamosus lectin bound to human-type influenza-binding epitope Neu5Aca2-6Galb1-4GlcNAc

PDB ID 3phz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools