This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4a1f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:45, 9 May 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of C-terminal domain of Helicobacter pylori DnaB Helicase==
==Crystal structure of C-terminal domain of Helicobacter pylori DnaB Helicase==
-
<StructureSection load='4a1f' size='340' side='right' caption='[[4a1f]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+
<StructureSection load='4a1f' size='340' side='right'caption='[[4a1f]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4a1f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4A1F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4A1F FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4a1f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4A1F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4A1F FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA_helicase DNA helicase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.4.12 3.6.4.12] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4a1f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4a1f OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4a1f RCSB], [http://www.ebi.ac.uk/pdbsum/4a1f PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4a1f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4a1f OCA], [https://pdbe.org/4a1f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4a1f RCSB], [https://www.ebi.ac.uk/pdbsum/4a1f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4a1f ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DNAB_HELPY DNAB_HELPY] Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 15: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4a1f" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Helicase|Helicase]]
+
*[[Helicase 3D structures|Helicase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: DNA helicase]]
 
[[Category: Helicobacter pylori]]
[[Category: Helicobacter pylori]]
-
[[Category: Kapp, U]]
+
[[Category: Large Structures]]
-
[[Category: Stelter, M]]
+
[[Category: Kapp U]]
-
[[Category: Terradot, L]]
+
[[Category: Stelter M]]
-
[[Category: Timmins, J]]
+
[[Category: Terradot L]]
-
[[Category: Atpase]]
+
[[Category: Timmins J]]
-
[[Category: Dna replication]]
+
-
[[Category: Hydrolase]]
+

Current revision

Crystal structure of C-terminal domain of Helicobacter pylori DnaB Helicase

PDB ID 4a1f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools