4gip
From Proteopedia
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==Structure of the cleavage-activated prefusion form of the parainfluenza virus 5 (PIV5) fusion protein== | ==Structure of the cleavage-activated prefusion form of the parainfluenza virus 5 (PIV5) fusion protein== | ||
| - | <StructureSection load='4gip' size='340' side='right' caption='[[4gip]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='4gip' size='340' side='right'caption='[[4gip]], [[Resolution|resolution]] 2.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4gip]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4gip]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Simian_virus_5_(strain_W3) Simian virus 5 (strain W3)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GIP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4GIP FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4gip FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gip OCA], [https://pdbe.org/4gip PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4gip RCSB], [https://www.ebi.ac.uk/pdbsum/4gip PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4gip ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/FUS_PIV5 FUS_PIV5] Class I viral fusion protein. Under the current model, the protein has at least 3 conformational states: pre-fusion native state, pre-hairpin intermediate state, and post-fusion hairpin state. During viral and plasma cell membrane fusion, the heptad repeat (HR) regions assume a trimer-of-hairpins structure, positioning the fusion peptide in close proximity to the C-terminal region of the ectodomain. The formation of this structure appears to drive apposition and subsequent fusion of viral and plasma cell membranes. Directs fusion of viral and cellular membranes leading to delivery of the nucleocapsid into the cytoplasm. This fusion is pH independent and occurs directly at the outer cell membrane. The trimer of F1-F2 (F protein) probably interacts with HN at the virion surface. Upon HN binding to its cellular receptor, the hydrophobic fusion peptide is unmasked and interacts with the cellular membrane, inducing the fusion between cell and virion membranes. Later in infection, F proteins expressed at the plasma membrane of infected cells could mediate fusion with adjacent cells to form syncytia, a cytopathic effect that could lead to tissue necrosis (By similarity). | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 4gip" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Jardetzky | + | [[Category: Large Structures]] |
| - | [[Category: Kors | + | [[Category: Jardetzky TS]] |
| - | [[Category: Lamb | + | [[Category: Kors CA]] |
| - | [[Category: Leser | + | [[Category: Lamb RA]] |
| - | [[Category: Liu | + | [[Category: Leser GP]] |
| - | [[Category: Welch | + | [[Category: Liu Y]] |
| - | + | [[Category: Welch BD]] | |
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Current revision
Structure of the cleavage-activated prefusion form of the parainfluenza virus 5 (PIV5) fusion protein
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Categories: Large Structures | Jardetzky TS | Kors CA | Lamb RA | Leser GP | Liu Y | Welch BD
