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1odj

From Proteopedia

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[[Image:1odj.jpg|left|200px]]
 
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{{Structure
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==PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS==
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|PDB= 1odj |SIZE=350|CAPTION= <scene name='initialview01'>1odj</scene>, resolution 2.40&Aring;
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<StructureSection load='1odj' size='340' side='right'caption='[[1odj]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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|SITE= <scene name='pdbsite=AC1:Gmp+Binding+Site+For+Chain+F'>AC1</scene>
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> and <scene name='pdbligand=GMP:GUANOSINE'>GMP</scene>
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<table><tr><td colspan='2'>[[1odj]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ODJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ODJ FirstGlance]. <br>
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|ACTIVITY= [http://en.wikipedia.org/wiki/S-methyl-5-thioadenosine_phosphorylase S-methyl-5-thioadenosine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.28 2.4.2.28]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GMP:GUANOSINE'>GMP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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}}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1odj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1odj OCA], [https://pdbe.org/1odj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1odj RCSB], [https://www.ebi.ac.uk/pdbsum/1odj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1odj ProSAT], [https://www.topsan.org/Proteins/RSGI/1odj TOPSAN]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q5SID9_THET8 Q5SID9_THET8]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/od/1odj_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1odj ConSurf].
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<div style="clear:both"></div>
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'''PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS'''
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==See Also==
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*[[Purine nucleoside phosphorylase 3D structures|Purine nucleoside phosphorylase 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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1ODJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ODJ OCA].
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[[Category: Large Structures]]
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[[Category: S-methyl-5-thioadenosine phosphorylase]]
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[[Category: Thermus thermophilus HB8]]
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[[Category: Single protein]]
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[[Category: Inagaki E]]
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[[Category: Thermus thermophilus]]
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[[Category: Miyano M]]
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[[Category: Inagaki, E.]]
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[[Category: Tahirov TH]]
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[[Category: Miyano, M.]]
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[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
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[[Category: Tahirov, T H.]]
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[[Category: GMP]]
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[[Category: SO4]]
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[[Category: alpha-beta protein]]
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[[Category: guanosine]]
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[[Category: nucleoside phosphorylase]]
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[[Category: riken structural genomics/proteomics initiative]]
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[[Category: rsgi]]
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[[Category: structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 13:09:19 2008''
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Current revision

PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS

PDB ID 1odj

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