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3kpx
From Proteopedia
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==Crystal Structure Analysis of photoprotein clytin== | ==Crystal Structure Analysis of photoprotein clytin== | ||
| - | <StructureSection load='3kpx' size='340' side='right' caption='[[3kpx]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='3kpx' size='340' side='right'caption='[[3kpx]], [[Resolution|resolution]] 1.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3kpx]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3kpx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clytia_gregaria Clytia gregaria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KPX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KPX FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.899Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CZH:C2-HYDROPEROXY-COELENTERAZINE'>CZH</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kpx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kpx OCA], [https://pdbe.org/3kpx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kpx RCSB], [https://www.ebi.ac.uk/pdbsum/3kpx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kpx ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/D7PM14_CLYGR D7PM14_CLYGR] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kp/3kpx_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kp/3kpx_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kpx ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 3kpx" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Clytia gregaria]] |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Lee | + | [[Category: Lee J]] |
| - | [[Category: Li | + | [[Category: Li Y]] |
| - | [[Category: Liu | + | [[Category: Liu Z-J]] |
| - | [[Category: Stepanyuk | + | [[Category: Stepanyuk GA]] |
| - | [[Category: Titushin | + | [[Category: Titushin MS]] |
| - | [[Category: Vysotski | + | [[Category: Vysotski ES]] |
| - | [[Category: Wang | + | [[Category: Wang B-C]] |
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Current revision
Crystal Structure Analysis of photoprotein clytin
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Categories: Clytia gregaria | Large Structures | Lee J | Li Y | Liu Z-J | Stepanyuk GA | Titushin MS | Vysotski ES | Wang B-C

