This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3j7p

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:17, 24 January 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Structure of the 80S mammalian ribosome bound to eEF2==
==Structure of the 80S mammalian ribosome bound to eEF2==
-
<StructureSection load='3j7p' size='340' side='right' caption='[[3j7p]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
+
<SX load='3j7p' size='340' side='right' viewer='molstar' caption='[[3j7p]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3j7p]] is a 82 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. This structure supersedes the now removed PDB entries and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3j74 3j74]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3J7P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3J7P FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3j7p]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4w21 4w21], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4w22 4w22], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4w23 4w23], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vx3 1vx3], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vx4 1vx4], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vx5 1vx5] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3j74 3j74]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3J7P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3J7P FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.5&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3j7o|3j7o]], [[3j7q|3j7q]], [[3j7r|3j7r]], [[4w21|4w21]], [[4w22|4w22]], [[4w23|4w23]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3j7p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3j7p OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3j7p RCSB], [http://www.ebi.ac.uk/pdbsum/3j7p PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3j7p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3j7p OCA], [https://pdbe.org/3j7p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3j7p RCSB], [https://www.ebi.ac.uk/pdbsum/3j7p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3j7p ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/F2Z567_PIG F2Z567_PIG]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 15: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3j7p" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Elongation factor 3D structures|Elongation factor 3D structures]]
 +
*[[Ribosome 3D structures|Ribosome 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
-
</StructureSection>
+
</SX>
 +
[[Category: Large Structures]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
-
[[Category: Fernandez, I S]]
+
[[Category: Fernandez IS]]
-
[[Category: Hegde, R S]]
+
[[Category: Hegde RS]]
-
[[Category: Scheres, S H.W]]
+
[[Category: Scheres SHW]]
-
[[Category: Voorhees, R M]]
+
[[Category: Voorhees RM]]
-
[[Category: Eef2]]
+
-
[[Category: Mammalian]]
+
-
[[Category: Ribosome]]
+
-
[[Category: Sec61]]
+
-
[[Category: Translation]]
+
-
[[Category: Translocation]]
+

Current revision

Structure of the 80S mammalian ribosome bound to eEF2

3j7p, resolution 3.50Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools