We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

4wzk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:45, 10 January 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of P domain from norovirus strain Saga4 in complex with HBGA type H2 (triglycan)==
==Crystal structure of P domain from norovirus strain Saga4 in complex with HBGA type H2 (triglycan)==
-
<StructureSection load='4wzk' size='340' side='right' caption='[[4wzk]], [[Resolution|resolution]] 1.49&Aring;' scene=''>
+
<StructureSection load='4wzk' size='340' side='right'caption='[[4wzk]], [[Resolution|resolution]] 1.49&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4wzk]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WZK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4WZK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4wzk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Norovirus_Hu/GII-4/Saga4/2006/JP Norovirus Hu/GII-4/Saga4/2006/JP]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WZK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4WZK FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.49&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4wze|4wze]], [[4oox|4oox]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=PRD_900125:H+type+2+antigen,+alpha+anomer'>PRD_900125</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4wzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wzk OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4wzk RCSB], [http://www.ebi.ac.uk/pdbsum/4wzk PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4wzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wzk OCA], [https://pdbe.org/4wzk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4wzk RCSB], [https://www.ebi.ac.uk/pdbsum/4wzk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4wzk ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/B5BTR7_9CALI B5BTR7_9CALI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 15: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4wzk" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Hansman, G S]]
+
[[Category: Large Structures]]
-
[[Category: Singh, B K]]
+
[[Category: Norovirus Hu/GII-4/Saga4/2006/JP]]
-
[[Category: Protruding domain]]
+
[[Category: Hansman GS]]
-
[[Category: Viral capsid protein]]
+
[[Category: Singh BK]]
-
[[Category: Viral protein]]
+

Current revision

Crystal structure of P domain from norovirus strain Saga4 in complex with HBGA type H2 (triglycan)

PDB ID 4wzk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools