3hz8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:59, 9 October 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of the oxidized T176V DsbA1 mutant==
==Crystal structure of the oxidized T176V DsbA1 mutant==
-
<StructureSection load='3hz8' size='340' side='right' caption='[[3hz8]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
+
<StructureSection load='3hz8' size='340' side='right'caption='[[3hz8]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3hz8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis_mc58 Neisseria meningitidis mc58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HZ8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HZ8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3hz8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_MC58 Neisseria meningitidis MC58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HZ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HZ8 FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3dvw|3dvw]], [[3dvx|3dvx]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dsbA-1, NMB0278 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=122586 Neisseria meningitidis MC58])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hz8 OCA], [https://pdbe.org/3hz8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hz8 RCSB], [https://www.ebi.ac.uk/pdbsum/3hz8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hz8 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hz8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3hz8 RCSB], [http://www.ebi.ac.uk/pdbsum/3hz8 PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9K189_NEIMB Q9K189_NEIMB]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hz/3hz8_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hz/3hz8_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hz8 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 25: Line 27:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3hz8" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Neisseria meningitidis mc58]]
+
[[Category: Large Structures]]
-
[[Category: Carpentier, P]]
+
[[Category: Neisseria meningitidis MC58]]
-
[[Category: Iwema, T]]
+
[[Category: Carpentier P]]
-
[[Category: Jullian-Binard, C]]
+
[[Category: Iwema T]]
-
[[Category: Lafaye, C]]
+
[[Category: Jullian-Binard C]]
-
[[Category: Serre, L]]
+
[[Category: Lafaye C]]
-
[[Category: Disulfide bond]]
+
[[Category: Serre L]]
-
[[Category: Dsba]]
+
-
[[Category: Neisseria]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Thiol-oxidoreductase]]
+

Current revision

Crystal structure of the oxidized T176V DsbA1 mutant

PDB ID 3hz8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools