This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2x9c

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:26, 20 December 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
==CRYSTAL STRUCTURE OF A SOLUBLE PRGI MUTANT FROM SALMONELLA TYPHIMURIUM==
+
 
-
<StructureSection load='2x9c' size='340' side='right' caption='[[2x9c]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
+
==Crystal structure of a soluble PrgI mutant from Salmonella Typhimurium==
 +
<StructureSection load='2x9c' size='340' side='right'caption='[[2x9c]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2x9c]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X9C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2X9C FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2x9c]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X9C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2X9C FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2kv7|2kv7]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2x9c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x9c OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2x9c RCSB], [http://www.ebi.ac.uk/pdbsum/2x9c PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2x9c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x9c OCA], [https://pdbe.org/2x9c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2x9c RCSB], [https://www.ebi.ac.uk/pdbsum/2x9c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2x9c ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PRGI_SALTY PRGI_SALTY] Required for invasion of epithelial cells.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x9/2x9c_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x9/2x9c_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2x9c ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 24: Line 27:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 2x9c" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
+
[[Category: Large Structures]]
-
[[Category: Ader, C]]
+
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344]]
-
[[Category: Baldus, M]]
+
[[Category: Ader C]]
-
[[Category: Delissen, F]]
+
[[Category: Baldus M]]
-
[[Category: Goosmann, C]]
+
[[Category: Delissen F]]
-
[[Category: Griesinger, C]]
+
[[Category: Goosmann C]]
-
[[Category: Kolbe, M]]
+
[[Category: Griesinger C]]
-
[[Category: Lange, A]]
+
[[Category: Kolbe M]]
-
[[Category: Laube, B]]
+
[[Category: Lange A]]
-
[[Category: Poyraz, O]]
+
[[Category: Laube B]]
-
[[Category: Schmidt, H]]
+
[[Category: Poyraz O]]
-
[[Category: Seidel, K]]
+
[[Category: Schmidt H]]
-
[[Category: Tenenboim, H]]
+
[[Category: Seidel K]]
-
[[Category: Thuenemann, A F]]
+
[[Category: Tenenboim H]]
-
[[Category: Zychlinsky, A]]
+
[[Category: Thuenemann AF]]
-
[[Category: Bacterial pathogenesis]]
+
[[Category: Zychlinsky A]]
-
[[Category: Needle protomer]]
+
-
[[Category: Protein transport]]
+

Current revision

Crystal structure of a soluble PrgI mutant from Salmonella Typhimurium

PDB ID 2x9c

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools