2y1w
From Proteopedia
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==CRYSTAL STRUCTURE OF COACTIVATOR ASSOCIATED ARGININE METHYLTRANSFERASE 1 (CARM1) IN COMPLEX WITH SINEFUNGIN AND INDOLE INHIBITOR== | ==CRYSTAL STRUCTURE OF COACTIVATOR ASSOCIATED ARGININE METHYLTRANSFERASE 1 (CARM1) IN COMPLEX WITH SINEFUNGIN AND INDOLE INHIBITOR== | ||
- | <StructureSection load='2y1w' size='340' side='right' caption='[[2y1w]], [[Resolution|resolution]] 2.10Å' scene=''> | + | <StructureSection load='2y1w' size='340' side='right'caption='[[2y1w]], [[Resolution|resolution]] 2.10Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2y1w]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2y1w]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Y1W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Y1W FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=849:2-{4-[3-FLUORO-2-(2-METHOXYPHENYL)-1H-INDOL-5-YL]+PIPERIDIN-1-YL}-N-METHYLETHANAMINE'>849</scene>, <scene name='pdbligand=SFG:SINEFUNGIN'>SFG</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=849:2-{4-[3-FLUORO-2-(2-METHOXYPHENYL)-1H-INDOL-5-YL]+PIPERIDIN-1-YL}-N-METHYLETHANAMINE'>849</scene>, <scene name='pdbligand=SFG:SINEFUNGIN'>SFG</scene></td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2y1w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2y1w OCA], [https://pdbe.org/2y1w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2y1w RCSB], [https://www.ebi.ac.uk/pdbsum/2y1w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2y1w ProSAT]</span></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/CARM1_HUMAN CARM1_HUMAN] Methylates (mono- and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in several proteins involved in DNA packaging, transcription regulation, pre-mRNA splicing, and mRNA stability. Recruited to promoters upon gene activation together with histone acetyltransferases from EP300/P300 and p160 families, methylates histone H3 at 'Arg-17' (H3R17me), forming mainly asymmetric dimethylarginine (H3R17me2a), leading to activate transcription via chromatin remodeling. During nuclear hormone receptor activation and TCF7L2/TCF4 activation, acts synergically with EP300/P300 and either one of the p160 histone acetyltransferases NCOA1/SRC1, NCOA2/GRIP1 and NCOA3/ACTR or CTNNB1/beta-catenin to activate transcription. During myogenic transcriptional activation, acts together with NCOA3/ACTR as a coactivator for MEF2C. During monocyte inflammatory stimulation, acts together with EP300/P300 as a coactivator for NF-kappa-B. Acts as coactivator for PPARG, promotes adipocyte differentiation and the accumulation of brown fat tissue. Plays a role in the regulation of pre-mRNA alternative splicing by methylation of splicing factors. Also seems to be involved in p53/TP53 transcriptional activation. Methylates EP300/P300, both at 'Arg-2142', which may loosen its interaction with NCOA2/GRIP1, and at 'Arg-580' and 'Arg-604' in the KIX domain, which impairs its interaction with CREB and inhibits CREB-dependent transcriptional activation. Also methylates arginine residues in RNA-binding proteins PABPC1, ELAVL1 and ELAV4, which may affect their mRNA-stabilizing properties and the half-life of their target mRNAs.<ref>PMID:16497732</ref> <ref>PMID:19405910</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
+ | <div class="pdbe-citations 2y1w" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
- | *[[Histone methyltransferase|Histone methyltransferase]] | + | *[[Histone methyltransferase 3D structures|Histone methyltransferase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Histone-arginine N-methyltransferase]] | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
- | [[Category: Bandiera | + | [[Category: Large Structures]] |
- | [[Category: Bertrand | + | [[Category: Bandiera T]] |
- | [[Category: Duke | + | [[Category: Bertrand JA]] |
- | [[Category: Fasolini | + | [[Category: Duke GJ]] |
- | [[Category: Jayaraman | + | [[Category: Fasolini M]] |
- | [[Category: Kish | + | [[Category: Jayaraman L]] |
- | [[Category: Klei | + | [[Category: Kish KF]] |
- | [[Category: Purandare | + | [[Category: Klei HE]] |
- | [[Category: Rosettani | + | [[Category: Purandare AV]] |
- | [[Category: Sack | + | [[Category: Rosettani P]] |
- | [[Category: Thieffine | + | [[Category: Sack JS]] |
- | [[Category: Troiani | + | [[Category: Thieffine S]] |
- | [[Category: Xie | + | [[Category: Troiani S]] |
- | + | [[Category: Xie D]] | |
- | + |
Current revision
CRYSTAL STRUCTURE OF COACTIVATOR ASSOCIATED ARGININE METHYLTRANSFERASE 1 (CARM1) IN COMPLEX WITH SINEFUNGIN AND INDOLE INHIBITOR
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Categories: Homo sapiens | Large Structures | Bandiera T | Bertrand JA | Duke GJ | Fasolini M | Jayaraman L | Kish KF | Klei HE | Purandare AV | Rosettani P | Sack JS | Thieffine S | Troiani S | Xie D