2yoc
From Proteopedia
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==Crystal structure of PulA from Klebsiella oxytoca== | ==Crystal structure of PulA from Klebsiella oxytoca== | ||
- | <StructureSection load='2yoc' size='340' side='right' caption='[[2yoc]], [[Resolution|resolution]] 2.88Å' scene=''> | + | <StructureSection load='2yoc' size='340' side='right'caption='[[2yoc]], [[Resolution|resolution]] 2.88Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2yoc]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2yoc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_oxytoca Klebsiella oxytoca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YOC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YOC FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.88Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yoc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yoc OCA], [https://pdbe.org/2yoc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yoc RCSB], [https://www.ebi.ac.uk/pdbsum/2yoc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yoc ProSAT]</span></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/PULA_KLEPN PULA_KLEPN] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The Klebsiella lipoprotein pullulanase (PulA) is exported to the periplasm, triacylated, and anchored via lipids in the inner membrane (IM) prior to its transport to the bacterial surface through a type II secretion system (T2SS). X-Ray crystallography and atomistic molecular dynamics (MD) simulations of PulA in a 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine (POPE) model membrane provided an unprecedented molecular view of an N-terminal unstructured tether and the IM lipoprotein retention signal, and revealed novel interactions with the IM via N-terminal immunoglobulin-like domains in PulA. An efficiently secreted nonacylated variant (PulANA) showed similar peripheral membrane association during MD simulations, consistent with the binding of purified PulANA to liposomes. Remarkably, combined X-ray, MD, and functional studies identified a novel subdomain, Ins, inserted in the alpha-amylase domain, which is required for PulA secretion. Available data support a model in which PulA binding to the IM promotes interactions with the T2SS, possibly via the Ins subdomain. | ||
+ | |||
+ | Structural Basis of Pullulanase Membrane Binding and Secretion Revealed by X-Ray Crystallography, Molecular Dynamics and Biochemical Analysis.,East A, Mechaly AE, Huysmans GH, Bernarde C, Tello-Manigne D, Nadeau N, Pugsley AP, Buschiazzo A, Alzari PM, Bond PJ, Francetic O Structure. 2016 Jan 5;24(1):92-104. doi: 10.1016/j.str.2015.10.023. Epub 2015 Dec, 10. PMID:26688215<ref>PMID:26688215</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 2yoc" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Klebsiella oxytoca]] | [[Category: Klebsiella oxytoca]] | ||
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: Alzari | + | [[Category: Alzari PM]] |
- | [[Category: Bernarde | + | [[Category: Bernarde C]] |
- | [[Category: Buschiazzo | + | [[Category: Buschiazzo A]] |
- | [[Category: Francetic | + | [[Category: Francetic O]] |
- | [[Category: Mechaly | + | [[Category: Mechaly AE]] |
- | [[Category: Nadeau | + | [[Category: Nadeau N]] |
- | [[Category: Pugsley | + | [[Category: Pugsley AP]] |
- | [[Category: Tello-Manigne | + | [[Category: Tello-Manigne D]] |
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Current revision
Crystal structure of PulA from Klebsiella oxytoca
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