3lyv
From Proteopedia
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==Crystal structure of a domain of ribosome-associated factor Y from streptococcus pyogenes serotype M6. Northeast Structural Genomics Consortium target id DR64A== | ==Crystal structure of a domain of ribosome-associated factor Y from streptococcus pyogenes serotype M6. Northeast Structural Genomics Consortium target id DR64A== | ||
| - | <StructureSection load='3lyv' size='340' side='right' caption='[[3lyv]], [[Resolution|resolution]] 2.70Å' scene=''> | + | <StructureSection load='3lyv' size='340' side='right'caption='[[3lyv]], [[Resolution|resolution]] 2.70Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3lyv]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3lyv]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_serotype_M6 Streptococcus pyogenes serotype M6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LYV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LYV FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lyv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lyv OCA], [https://pdbe.org/3lyv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lyv RCSB], [https://www.ebi.ac.uk/pdbsum/3lyv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lyv ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/HPF_STRP6 HPF_STRP6] Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.[HAMAP-Rule:MF_00839] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ly/3lyv_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ly/3lyv_consurf.spt"</scriptWhenChecked> |
| - | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lyv ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Streptococcus pyogenes]] | + | [[Category: Large Structures]] |
| - | [[Category: Acton | + | [[Category: Streptococcus pyogenes serotype M6]] |
| - | [[Category: Baran | + | [[Category: Acton TB]] |
| - | [[Category: Cunningham | + | [[Category: Baran MC]] |
| - | [[Category: Forouhar | + | [[Category: Cunningham K]] |
| - | [[Category: Hunt | + | [[Category: Forouhar F]] |
| - | [[Category: Janjua | + | [[Category: Hunt JF]] |
| - | [[Category: Liu | + | [[Category: Janjua H]] |
| - | [[Category: Montelione | + | [[Category: Liu J]] |
| - | + | [[Category: Montelione GT]] | |
| - | [[Category: Neely | + | [[Category: Neely H]] |
| - | [[Category: Owens | + | [[Category: Owens L]] |
| - | [[Category: Seetharaman | + | [[Category: Seetharaman J]] |
| - | [[Category: Tong | + | [[Category: Tong L]] |
| - | [[Category: Wang | + | [[Category: Wang D]] |
| - | [[Category: Xiao | + | [[Category: Xiao R]] |
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Current revision
Crystal structure of a domain of ribosome-associated factor Y from streptococcus pyogenes serotype M6. Northeast Structural Genomics Consortium target id DR64A
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Categories: Large Structures | Streptococcus pyogenes serotype M6 | Acton TB | Baran MC | Cunningham K | Forouhar F | Hunt JF | Janjua H | Liu J | Montelione GT | Neely H | Owens L | Seetharaman J | Tong L | Wang D | Xiao R
