This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3n8e

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:28, 21 February 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Substrate binding domain of the human Heat Shock 70kDa protein 9 (mortalin)==
==Substrate binding domain of the human Heat Shock 70kDa protein 9 (mortalin)==
-
<StructureSection load='3n8e' size='340' side='right' caption='[[3n8e]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
+
<StructureSection load='3n8e' size='340' side='right'caption='[[3n8e]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3n8e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N8E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3N8E FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3n8e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N8E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3N8E FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GRP75, HSPA9, HSPA9B ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3n8e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3n8e OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3n8e RCSB], [http://www.ebi.ac.uk/pdbsum/3n8e PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3n8e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3n8e OCA], [https://pdbe.org/3n8e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3n8e RCSB], [https://www.ebi.ac.uk/pdbsum/3n8e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3n8e ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GRP75_HUMAN GRP75_HUMAN] Implicated in the control of cell proliferation and cellular aging. May also act as a chaperone.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n8/3n8e_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n8/3n8e_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3n8e ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Arrowsmith, C H]]
+
[[Category: Large Structures]]
-
[[Category: Berg, S van der]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Berglund, H]]
+
[[Category: Berglund H]]
-
[[Category: Bountra, C]]
+
[[Category: Bountra C]]
-
[[Category: Collins, R]]
+
[[Category: Collins R]]
-
[[Category: Edwards, A M]]
+
[[Category: Edwards AM]]
-
[[Category: Flodin, S]]
+
[[Category: Flodin S]]
-
[[Category: Flores, A]]
+
[[Category: Flores A]]
-
[[Category: Graslund, S]]
+
[[Category: Graslund S]]
-
[[Category: Hammarstrom, M]]
+
[[Category: Hammarstrom M]]
-
[[Category: Johansson, I]]
+
[[Category: Johansson I]]
-
[[Category: Karlberg, T]]
+
[[Category: Karlberg T]]
-
[[Category: Kotenyova, T]]
+
[[Category: Kotenyova T]]
-
[[Category: Moche, M]]
+
[[Category: Moche M]]
-
[[Category: Nordlund, P]]
+
[[Category: Nordlund P]]
-
[[Category: Nyman, T]]
+
[[Category: Nyman T]]
-
[[Category: Persson, C]]
+
[[Category: Persson C]]
-
[[Category: Structural genomic]]
+
[[Category: Schuler H]]
-
[[Category: Schuler, H]]
+
[[Category: Schutz P]]
-
[[Category: Schutz, P]]
+
[[Category: Siponen MI]]
-
[[Category: Siponen, M I]]
+
[[Category: Svensson L]]
-
[[Category: Svensson, L]]
+
[[Category: Thorsell AG]]
-
[[Category: Thorsell, A G]]
+
[[Category: Tresaugues L]]
-
[[Category: Tresaugues, L]]
+
[[Category: Wahlberg E]]
-
[[Category: Wahlberg, E]]
+
[[Category: Weigelt J]]
-
[[Category: Weigelt, J]]
+
[[Category: Welin M]]
-
[[Category: Welin, M]]
+
[[Category: Wisniewska M]]
-
[[Category: Wisniewska, M]]
+
[[Category: Van der Berg S]]
-
[[Category: Beta-sandwich]]
+
-
[[Category: Chaperone]]
+
-
[[Category: Helix]]
+
-
[[Category: Sgc]]
+
-
[[Category: Substrate binding domain]]
+

Current revision

Substrate binding domain of the human Heat Shock 70kDa protein 9 (mortalin)

PDB ID 3n8e

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools