This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4gpc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:51, 20 March 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Structure of the biliverdin-HmuO, heme oxygenase from Corynebacterium diphtheriae==
==Structure of the biliverdin-HmuO, heme oxygenase from Corynebacterium diphtheriae==
-
<StructureSection load='4gpc' size='340' side='right' caption='[[4gpc]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
+
<StructureSection load='4gpc' size='340' side='right'caption='[[4gpc]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4gpc]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Corynebacterium_diphtheriae Corynebacterium diphtheriae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GPC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4GPC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4gpc]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_diphtheriae Corynebacterium diphtheriae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GPC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4GPC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ASC:ASCORBIC+ACID'>ASC</scene>, <scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1iw0|1iw0]], [[1iw1|1iw1]], [[4goh|4goh]], [[4gpf|4gpf]], [[4gph|4gph]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ASC:ASCORBIC+ACID'>ASC</scene>, <scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Heme_oxygenase Heme oxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.99.3 1.14.99.3] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4gpc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gpc OCA], [https://pdbe.org/4gpc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4gpc RCSB], [https://www.ebi.ac.uk/pdbsum/4gpc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4gpc ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4gpc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gpc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4gpc RCSB], [http://www.ebi.ac.uk/pdbsum/4gpc PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q54AI1_CORDP Q54AI1_CORDP]
==See Also==
==See Also==
-
*[[Heme oxygenase|Heme oxygenase]]
+
*[[Heme oxygenase 3D structures|Heme oxygenase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Corynebacterium diphtheriae]]
[[Category: Corynebacterium diphtheriae]]
-
[[Category: Heme oxygenase]]
+
[[Category: Large Structures]]
-
[[Category: Ikeda-Saito, M]]
+
[[Category: Ikeda-Saito M]]
-
[[Category: Unno, M]]
+
[[Category: Unno M]]
-
[[Category: Helix]]
+
-
[[Category: Heme]]
+
-
[[Category: Heme degradation]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Structure of the biliverdin-HmuO, heme oxygenase from Corynebacterium diphtheriae

PDB ID 4gpc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools