4efe
From Proteopedia
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==crystal structure of DNA ligase== | ==crystal structure of DNA ligase== | ||
| - | <StructureSection load='4efe' size='340' side='right' caption='[[4efe]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='4efe' size='340' side='right'caption='[[4efe]], [[Resolution|resolution]] 2.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4efe]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4efe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EFE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4EFE FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=0OV:[4-AMINO-2-{[(1S,2R)-2-METHYLCYCLOHEXYL]OXY}-5-OXOPYRIDO[2,3-D]PYRIMIDIN-8(5H)-YL]ACETONITRILE'>0OV</scene>, <scene name='pdbligand=NMN:BETA-NICOTINAMIDE+RIBOSE+MONOPHOSPHATE'>NMN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0OV:[4-AMINO-2-{[(1S,2R)-2-METHYLCYCLOHEXYL]OXY}-5-OXOPYRIDO[2,3-D]PYRIMIDIN-8(5H)-YL]ACETONITRILE'>0OV</scene>, <scene name='pdbligand=NMN:BETA-NICOTINAMIDE+RIBOSE+MONOPHOSPHATE'>NMN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4efe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4efe OCA], [https://pdbe.org/4efe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4efe RCSB], [https://www.ebi.ac.uk/pdbsum/4efe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4efe ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/DNLJ_ENTFA DNLJ_ENTFA] DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA (By similarity). | ||
==See Also== | ==See Also== | ||
| - | *[[DNA ligase|DNA ligase]] | + | *[[DNA ligase 3D structures|DNA ligase 3D structures]] |
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Enterococcus faecalis]] | [[Category: Enterococcus faecalis]] | ||
| - | [[Category: Charifson | + | [[Category: Large Structures]] |
| - | [[Category: Wang | + | [[Category: Charifson P]] |
| - | [[Category: Wei | + | [[Category: Wang T]] |
| - | [[Category: Xu | + | [[Category: Wei Y]] |
| - | + | [[Category: Xu W]] | |
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Current revision
crystal structure of DNA ligase
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