This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4jgh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:42, 20 September 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Structure of the SOCS2-Elongin BC complex bound to an N-terminal fragment of Cullin5==
==Structure of the SOCS2-Elongin BC complex bound to an N-terminal fragment of Cullin5==
-
<StructureSection load='4jgh' size='340' side='right' caption='[[4jgh]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
+
<StructureSection load='4jgh' size='340' side='right'caption='[[4jgh]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4jgh]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JGH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JGH FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4jgh]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JGH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JGH FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CIS2, Homo sapiens, SOCS2, SSI2, STATI2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]), Mus musculus, Tceb2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus]), Mus musculus, Tceb1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus]), CUL5, Homo sapiens, VACM1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jgh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jgh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4jgh RCSB], [http://www.ebi.ac.uk/pdbsum/4jgh PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jgh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jgh OCA], [https://pdbe.org/4jgh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jgh RCSB], [https://www.ebi.ac.uk/pdbsum/4jgh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jgh ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SOCS2_HUMAN SOCS2_HUMAN] SOCS family proteins form part of a classical negative feedback system that regulates cytokine signal transduction. SOCS2 appears to be a negative regulator in the growth hormone/IGF1 signaling pathway. Probable substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 14: Line 17:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4jgh" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Transcription factor SIII|Transcription factor SIII]]
+
*[[Cullin 3D structures|Cullin 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 22: Line 26:
</StructureSection>
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Joo, K]]
+
[[Category: Joo K]]
-
[[Category: Jung, J U]]
+
[[Category: Jung JU]]
-
[[Category: Kim, Y K]]
+
[[Category: Kim YK]]
-
[[Category: Ku, B]]
+
[[Category: Ku B]]
-
[[Category: Kwak, M J]]
+
[[Category: Kwak MJ]]
-
[[Category: Lee, J]]
+
[[Category: Lee J]]
-
[[Category: Oh, B H]]
+
[[Category: Oh BH]]
-
[[Category: Suh, H Y]]
+
[[Category: Suh HY]]
-
[[Category: Cullin-ring e3 ubiquitin ligase]]
+
-
[[Category: Cytosol]]
+
-
[[Category: Ligase]]
+
-
[[Category: Ubiquitination]]
+

Current revision

Structure of the SOCS2-Elongin BC complex bound to an N-terminal fragment of Cullin5

PDB ID 4jgh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools