This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4ic6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:14, 8 November 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of Deg8==
==Crystal structure of Deg8==
-
<StructureSection load='4ic6' size='340' side='right' caption='[[4ic6]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='4ic6' size='340' side='right'caption='[[4ic6]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4ic6]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IC6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4IC6 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4ic6]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IC6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IC6 FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ic5|4ic5]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DEGP8, At5g39830, K13H13.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ic6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ic6 OCA], [https://pdbe.org/4ic6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ic6 RCSB], [https://www.ebi.ac.uk/pdbsum/4ic6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ic6 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ic6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ic6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ic6 RCSB], [http://www.ebi.ac.uk/pdbsum/4ic6 PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DEGP8_ARATH DEGP8_ARATH] Probable serine protease.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 15: Line 17:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4ic6" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
Line 20: Line 23:
</StructureSection>
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
-
[[Category: Fan, H]]
+
[[Category: Large Structures]]
-
[[Category: Gao, F]]
+
[[Category: Fan H]]
-
[[Category: Gong, W]]
+
[[Category: Gao F]]
-
[[Category: Liu, L]]
+
[[Category: Gong W]]
-
[[Category: Sun, W]]
+
[[Category: Liu L]]
-
[[Category: Beta-barrel]]
+
[[Category: Sun W]]
-
[[Category: Hydrolase]]
+

Current revision

Crystal structure of Deg8

PDB ID 4ic6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools