This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4j00

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:34, 20 September 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal Structure of Fischerella Transcription Factor HetR complexed with 24mer DNA target==
==Crystal Structure of Fischerella Transcription Factor HetR complexed with 24mer DNA target==
-
<StructureSection load='4j00' size='340' side='right' caption='[[4j00]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
+
<StructureSection load='4j00' size='340' side='right'caption='[[4j00]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4j00]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Fischerella_thermalis_pcc_7521 Fischerella thermalis pcc 7521]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J00 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4J00 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4j00]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Anabaena Anabaena] and [https://en.wikipedia.org/wiki/Fischerella_thermalis_PCC_7521 Fischerella thermalis PCC 7521]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J00 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4J00 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.004&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4izz|4izz]], [[4j01|4j01]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hetR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=98439 Fischerella thermalis PCC 7521])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4j00 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j00 OCA], [https://pdbe.org/4j00 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4j00 RCSB], [https://www.ebi.ac.uk/pdbsum/4j00 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4j00 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4j00 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j00 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4j00 RCSB], [http://www.ebi.ac.uk/pdbsum/4j00 PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q2ACK9_9CYAN Q2ACK9_9CYAN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4j00" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Fischerella thermalis pcc 7521]]
+
[[Category: Anabaena]]
-
[[Category: Gornicki, P]]
+
[[Category: Fischerella thermalis PCC 7521]]
-
[[Category: Joachimiak, A]]
+
[[Category: Large Structures]]
-
[[Category: Joachimiak, G]]
+
[[Category: Gornicki P]]
-
[[Category: Kim, Y]]
+
[[Category: Joachimiak A]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak G]]
-
[[Category: Mcsg]]
+
[[Category: Kim Y]]
-
[[Category: Dna-binding domain]]
+
[[Category: MCSG]]
-
[[Category: Helix-turn-helix]]
+
-
[[Category: Psi-biology]]
+
-
[[Category: Transcription factor]]
+
-
[[Category: Transcription-dna complex]]
+

Current revision

Crystal Structure of Fischerella Transcription Factor HetR complexed with 24mer DNA target

PDB ID 4j00

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4j00"
Personal tools