1sl9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:18, 23 August 2023) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1sl9.gif|left|200px]]
 
-
{{Structure
+
==Obelin from Obelia longissima==
-
|PDB= 1sl9 |SIZE=350|CAPTION= <scene name='initialview01'>1sl9</scene>, resolution 1.17&Aring;
+
<StructureSection load='1sl9' size='340' side='right'caption='[[1sl9]], [[Resolution|resolution]] 1.17&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=CZH:C2-HYDROPEROXY-COELENTERAZINE'>CZH</scene>
+
<table><tr><td colspan='2'>[[1sl9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Obelia_longissima Obelia longissima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SL9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SL9 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.17&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CZH:C2-HYDROPEROXY-COELENTERAZINE'>CZH</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sl9 OCA], [https://pdbe.org/1sl9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sl9 RCSB], [https://www.ebi.ac.uk/pdbsum/1sl9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sl9 ProSAT]</span></td></tr>
-
 
+
</table>
-
'''Obelin from Obelia longissima'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/OBL_OBELO OBL_OBELO] Ca(2+)-dependent bioluminescence photoprotein. Displays an emission peak at 470 nm (blue light). Trace amounts of calcium ion trigger the intramolecular oxidation of the chromophore, coelenterazine into coelenteramide and CO(2) with the concomitant emission of light.
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1SL9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Obelia_longissima Obelia longissima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SL9 OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sl/1sl9_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sl9 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Obelia longissima]]
[[Category: Obelia longissima]]
-
[[Category: Single protein]]
+
[[Category: Deng L]]
-
[[Category: Deng, L.]]
+
[[Category: Lee J]]
-
[[Category: Lee, J.]]
+
[[Category: Liu Z-J]]
-
[[Category: Liu, Z J.]]
+
[[Category: Markova S]]
-
[[Category: Markova, S.]]
+
[[Category: Rose J]]
-
[[Category: Rose, J.]]
+
[[Category: Vysotski E]]
-
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
+
[[Category: Wang B-C]]
-
[[Category: Vysotski, E.]]
+
-
[[Category: Wang, B C.]]
+
-
[[Category: CZH]]
+
-
[[Category: atomic resolution]]
+
-
[[Category: bioluminescence]]
+
-
[[Category: calcium binding]]
+
-
[[Category: ef-hand]]
+
-
[[Category: obelin]]
+
-
[[Category: photoprotein]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: secsg]]
+
-
[[Category: southeast collaboratory for structural genomic]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:06:26 2008''
+

Current revision

Obelin from Obelia longissima

PDB ID 1sl9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1sl9"
Personal tools