This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4m6d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:32, 20 September 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of the aptamer minF-lysozyme complex.==
==Crystal structure of the aptamer minF-lysozyme complex.==
-
<StructureSection load='4m6d' size='340' side='right' caption='[[4m6d]], [[Resolution|resolution]] 2.68&Aring;' scene=''>
+
<StructureSection load='4m6d' size='340' side='right'caption='[[4m6d]], [[Resolution|resolution]] 2.68&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4m6d]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Chick Chick]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M6D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4M6D FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4m6d]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M6D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4M6D FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4m4o|4m4o]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.68&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LYZ, lyz1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9031 CHICK])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4m6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m6d OCA], [https://pdbe.org/4m6d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4m6d RCSB], [https://www.ebi.ac.uk/pdbsum/4m6d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4m6d ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4m6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m6d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4m6d RCSB], [http://www.ebi.ac.uk/pdbsum/4m6d PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
==See Also==
==See Also==
*[[Lysozyme 3D structures|Lysozyme 3D structures]]
*[[Lysozyme 3D structures|Lysozyme 3D structures]]
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Chick]]
+
[[Category: Gallus gallus]]
-
[[Category: Lysozyme]]
+
[[Category: Large Structures]]
-
[[Category: Almo, S C]]
+
[[Category: Almo SC]]
-
[[Category: Girvin, M]]
+
[[Category: Girvin M]]
-
[[Category: Malashkevich, V N]]
+
[[Category: Malashkevich VN]]
-
[[Category: Structural genomic]]
+
[[Category: Padlan FC]]
-
[[Category: Padlan, F C]]
+
[[Category: Toro R]]
-
[[Category: Toro, R]]
+
-
[[Category: Hydrolase-rna complex]]
+
-
[[Category: Nysgrc]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Psi-biology]]
+

Current revision

Crystal structure of the aptamer minF-lysozyme complex.

PDB ID 4m6d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools