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1svd

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[[Image:1svd.gif|left|200px]]
 
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{{Structure
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==The structure of Halothiobacillus neapolitanus RuBisCo==
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|PDB= 1svd |SIZE=350|CAPTION= <scene name='initialview01'>1svd</scene>, resolution 1.80&Aring;
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<StructureSection load='1svd' size='340' side='right'caption='[[1svd]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
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<table><tr><td colspan='2'>[[1svd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Halothiobacillus_neapolitanus Halothiobacillus neapolitanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SVD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SVD FirstGlance]. <br>
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|ACTIVITY= [http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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}}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1svd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1svd OCA], [https://pdbe.org/1svd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1svd RCSB], [https://www.ebi.ac.uk/pdbsum/1svd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1svd ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RBL1_HALNC RBL1_HALNC] RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.[HAMAP-Rule:MF_01338]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sv/1svd_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1svd ConSurf].
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<div style="clear:both"></div>
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'''The structure of Halothiobacillus neapolitanus RuBisCo'''
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==See Also==
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*[[RuBisCO 3D structures|RuBisCO 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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1SVD is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Halothiobacillus_neapolitanus Halothiobacillus neapolitanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SVD OCA].
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[[Category: Halothiobacillus neapolitanus]]
[[Category: Halothiobacillus neapolitanus]]
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[[Category: Protein complex]]
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[[Category: Large Structures]]
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[[Category: Ribulose-bisphosphate carboxylase]]
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[[Category: Cannon G]]
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[[Category: Cannon, G.]]
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[[Category: Kerfeld CA]]
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[[Category: Kerfeld, C A.]]
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[[Category: Pashkov I]]
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[[Category: Pashkov, I.]]
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[[Category: Sawaya MR]]
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[[Category: Sawaya, M R.]]
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[[Category: Tran K]]
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[[Category: Tran, K.]]
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[[Category: Williams E]]
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[[Category: Williams, E.]]
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[[Category: Yeates TO]]
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[[Category: Yeates, T O.]]
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[[Category: GOL]]
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[[Category: SO4]]
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[[Category: beta-alpha-barrel]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:10:08 2008''
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Current revision

The structure of Halothiobacillus neapolitanus RuBisCo

PDB ID 1svd

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