This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3jq4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:04, 1 November 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==The structure of the complex of the large ribosomal subunit from D. Radiodurans with the antibiotic lankacidin==
==The structure of the complex of the large ribosomal subunit from D. Radiodurans with the antibiotic lankacidin==
-
<StructureSection load='3jq4' size='340' side='right' caption='[[3jq4]], [[Resolution|resolution]] 3.52&Aring;' scene=''>
+
<StructureSection load='3jq4' size='340' side='right'caption='[[3jq4]], [[Resolution|resolution]] 3.52&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3jq4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JQ4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JQ4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3jq4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans_R1 Deinococcus radiodurans R1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JQ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JQ4 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=LC2:N-[(1S,2R,3E,5E,7S,9E,11E,13S,15R,19R)-7,13-DIHYDROXY-1,4,10,19-TETRAMETHYL-17,18-DIOXO-16-OXABICYCLO[13.2.2]NONADECA-3,5,9,11-TETRAEN-2-YL]-2-OXOPROPANAMIDE'>LC2</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.52&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1nkw|1nkw]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LC2:N-[(1S,2R,3E,5E,7S,9E,11E,13S,15R,19R)-7,13-DIHYDROXY-1,4,10,19-TETRAMETHYL-17,18-DIOXO-16-OXABICYCLO[13.2.2]NONADECA-3,5,9,11-TETRAEN-2-YL]-2-OXOPROPANAMIDE'>LC2</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jq4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jq4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3jq4 RCSB], [http://www.ebi.ac.uk/pdbsum/3jq4 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jq4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jq4 OCA], [https://pdbe.org/3jq4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jq4 RCSB], [https://www.ebi.ac.uk/pdbsum/3jq4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jq4 ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 15: Line 16:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3jq4" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Deinococcus radiodurans]]
+
[[Category: Deinococcus radiodurans R1]]
-
[[Category: Auerbach-Nevo, T]]
+
[[Category: Large Structures]]
-
[[Category: Bashan, A]]
+
[[Category: Auerbach-Nevo T]]
-
[[Category: Davidovich, C]]
+
[[Category: Bashan A]]
-
[[Category: Mermershtain, I]]
+
[[Category: Davidovich C]]
-
[[Category: Rozenberg, H]]
+
[[Category: Mermershtain I]]
-
[[Category: Yonath, A]]
+
[[Category: Rozenberg H]]
-
[[Category: Antibiotic]]
+
[[Category: Yonath A]]
-
[[Category: Inhibitor]]
+
-
[[Category: Lankacidin]]
+
-
[[Category: Lankamycin]]
+
-
[[Category: Macrolide]]
+
-
[[Category: Protein synthesis]]
+
-
[[Category: Ribosome structure]]
+
-
[[Category: Rna]]
+
-
[[Category: Synergism]]
+

Current revision

The structure of the complex of the large ribosomal subunit from D. Radiodurans with the antibiotic lankacidin

PDB ID 3jq4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3jq4"
Personal tools