1dz6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:44, 9 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
==FERROUS P450CAM FROM PSEUDOMONAS PUTIDA==
+
 
-
<StructureSection load='1dz6' size='340' side='right' caption='[[1dz6]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+
==ferrous p450cam from pseudomonas putida==
 +
<StructureSection load='1dz6' size='340' side='right'caption='[[1dz6]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1dz6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DZ6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DZ6 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1dz6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DZ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DZ6 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CAM:CAMPHOR'>CAM</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2cpp|2cpp]], [[3cpp|3cpp]], [[4cpp|4cpp]], [[5cpp|5cpp]], [[6cpp|6cpp]], [[7cpp|7cpp]], [[8cpp|8cpp]], [[1cp4|1cp4]], [[2cp4|2cp4]], [[3cp4|3cp4]], [[4cp4|4cp4]], [[5cp4|5cp4]], [[6cp4|6cp4]], [[1noo|1noo]], [[1pha|1pha]], [[1phb|1phb]], [[1phc|1phc]], [[1phd|1phd]], [[1phe|1phe]], [[1phf|1phf]], [[1phg|1phg]], [[1akd|1akd]], [[1dz4|1dz4]], [[1dz8|1dz8]], [[1dz9|1dz9]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CAM:CAMPHOR'>CAM</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dz6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1dz6 RCSB], [http://www.ebi.ac.uk/pdbsum/1dz6 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dz6 OCA], [https://pdbe.org/1dz6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dz6 RCSB], [https://www.ebi.ac.uk/pdbsum/1dz6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dz6 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CPXA_PSEPU CPXA_PSEPU] Involved in a camphor oxidation system.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dz/1dz6_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dz/1dz6_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dz6 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 25: Line 28:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 1dz6" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Cytochrome P450|Cytochrome P450]]
+
*[[Cytochrome P450 3D structures|Cytochrome P450 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pseudomonas putida]]
[[Category: Pseudomonas putida]]
-
[[Category: Benson, D E]]
+
[[Category: Benson DE]]
-
[[Category: Berendzen, J]]
+
[[Category: Berendzen J]]
-
[[Category: Chu, K]]
+
[[Category: Chu K]]
-
[[Category: Maves, S A]]
+
[[Category: Maves SA]]
-
[[Category: Petsko, G A]]
+
[[Category: Petsko GA]]
-
[[Category: Ringe, D]]
+
[[Category: Ringe D]]
-
[[Category: Schlichting, I]]
+
[[Category: Schlichting I]]
-
[[Category: Sligar, S G]]
+
[[Category: Sligar SG]]
-
[[Category: Stock, A M]]
+
[[Category: Stock AM]]
-
[[Category: Sweet, R M]]
+
[[Category: Sweet RM]]
-
[[Category: Heme]]
+
-
[[Category: Mono-oxygenase]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

ferrous p450cam from pseudomonas putida

PDB ID 1dz6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1dz6"
Personal tools