1vch

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:01, 28 December 2023) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1vch.gif|left|200px]]
 
-
{{Structure
+
==Crystal Structure of a Phosphoribosyltransferase-related protein from Thermus thermophilus==
-
|PDB= 1vch |SIZE=350|CAPTION= <scene name='initialview01'>1vch</scene>, resolution 1.94&Aring;
+
<StructureSection load='1vch' size='340' side='right'caption='[[1vch]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene> and <scene name='pdbligand=ACY:ACETIC ACID'>ACY</scene>
+
<table><tr><td colspan='2'>[[1vch]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VCH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VCH FirstGlance]. <br>
-
|ACTIVITY= [http://en.wikipedia.org/wiki/Adenine_phosphoribosyltransferase Adenine phosphoribosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.7 2.4.2.7]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vch FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vch OCA], [https://pdbe.org/1vch PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vch RCSB], [https://www.ebi.ac.uk/pdbsum/1vch PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vch ProSAT], [https://www.topsan.org/Proteins/RSGI/1vch TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal Structure of a Phosphoribosyltransferase-related protein from Thermus thermophilus'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q5SHW7_THET8 Q5SHW7_THET8]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1VCH is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VCH OCA].
+
Check<jmol>
-
[[Category: Adenine phosphoribosyltransferase]]
+
<jmolCheckbox>
-
[[Category: Protein complex]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vc/1vch_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vch ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Rehse PH]]
-
[[Category: Rehse, P H.]]
+
[[Category: Tahirov TH]]
-
[[Category: Tahirov, T H.]]
+
-
[[Category: ACY]]
+
-
[[Category: CA]]
+
-
[[Category: CL]]
+
-
[[Category: riken structural genomics/proteomics initiative]]
+
-
[[Category: rsgi]]
+
-
[[Category: structural genomic]]
+
-
[[Category: transferase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:43:45 2008''
+

Current revision

Crystal Structure of a Phosphoribosyltransferase-related protein from Thermus thermophilus

PDB ID 1vch

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1vch"
Personal tools