This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1wiy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:31, 13 March 2024) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1wiy.jpg|left|200px]]
 
-
{{Structure
+
==Crystal Structure Analysis of a 6-coordinated Cytochorome P450 from Thermus thermophilus HB8==
-
|PDB= 1wiy |SIZE=350|CAPTION= <scene name='initialview01'>1wiy</scene>, resolution 2.00&Aring;
+
<StructureSection load='1wiy' size='340' side='right'caption='[[1wiy]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=HEM:PROTOPORPHYRIN IX CONTAINING FE'>HEM</scene>
+
<table><tr><td colspan='2'>[[1wiy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WIY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WIY FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wiy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wiy OCA], [https://pdbe.org/1wiy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wiy RCSB], [https://www.ebi.ac.uk/pdbsum/1wiy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wiy ProSAT], [https://www.topsan.org/Proteins/RSGI/1wiy TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q53W59_THET8 Q53W59_THET8]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wi/1wiy_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wiy ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal Structure Analysis of a 6-coordinated Cytochorome P450 from Thermus thermophilus HB8'''
+
==See Also==
-
 
+
*[[Cytochrome P450 3D structures|Cytochrome P450 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
1WIY is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WIY OCA].
+
[[Category: Large Structures]]
-
[[Category: Protein complex]]
+
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
-
[[Category: Kaneko, M.]]
+
[[Category: Kaneko M]]
-
[[Category: Kousumi, Y.]]
+
[[Category: Kousumi Y]]
-
[[Category: Kuramitsu, S.]]
+
[[Category: Kuramitsu S]]
-
[[Category: Masui, R.]]
+
[[Category: Masui R]]
-
[[Category: Nakagawa, N.]]
+
[[Category: Nakagawa N]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Ueyama N]]
-
[[Category: Ueyama, N.]]
+
[[Category: Yamamoto H]]
-
[[Category: Yamamoto, H.]]
+
-
[[Category: HEM]]
+
-
[[Category: cytochrome]]
+
-
[[Category: p450]]
+
-
[[Category: riken structural genomics/proteomics initiative]]
+
-
[[Category: rsgi]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:57:36 2008''
+

Current revision

Crystal Structure Analysis of a 6-coordinated Cytochorome P450 from Thermus thermophilus HB8

PDB ID 1wiy

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools