2mwh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:11, 15 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 2mwh is ON HOLD until Paper Publication
+
==NMR solution structure of ligand-free OAA==
 +
<StructureSection load='2mwh' size='340' side='right'caption='[[2mwh]]' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2mwh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Planktothrix_agardhii Planktothrix agardhii]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2MWH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2MWH FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2mwh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mwh OCA], [https://pdbe.org/2mwh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2mwh RCSB], [https://www.ebi.ac.uk/pdbsum/2mwh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2mwh ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LEC1_PLAAG LEC1_PLAAG] Lectin specific for high mannose N-glycans, recognizes the branched moiety of these glycans. Does not recognize other types of N-glycans or monosaccharides. Agglutinates trypsin-treated rabbit erythrocytes. Does not require divalent cations for activity. Inhibits HIV replication in MT4 cells with an EC(50) of 45 nM. Binds to the HIV envelope glycoprotein gp120.<ref>PMID:10817903</ref> <ref>PMID:17314091</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Lectins from different sources have been shown to interfere with HIV infection by binding to the sugars of viral-envelope glycoproteins. Three-dimensional atomic structures of a number of HIV-inactivating lectins have been determined, both as free proteins and in glycan-bound forms. However, details on the mechanism of recognition and binding to sugars are elusive. Herein we focus on the anti-HIV lectin OAA from Oscillatoria agardhii: We show that in the absence of sugars in solution, both the sugar-free and sugar-bound protein conformations that were observed in the X-ray crystal structures exist as conformational substates. Our results suggest that glycan recognition occurs by conformational selection within the ground state; this model differs from the popular "excited-state" model. Our findings provide further insight into molecular recognition of the major receptor on the HIV virus by OAA. These details can potentially be used for the optimization and/or development of preventive anti-HIV therapeutics.
-
Authors: Lee, D., Carneiro, M.G., Koharudin, L.M., Griesinger, C., Gronenborn, A.M., Ban, D., Sabo, T., Trigo-Mourino, P., Mazur, A.
+
Sampling of Glycan-Bound Conformers by the Anti-HIV Lectin Oscillatoria agardhii agglutinin in the Absence of Sugar.,Carneiro MG, Koharudin LM, Ban D, Sabo TM, Trigo-Mourino P, Mazur A, Griesinger C, Gronenborn AM, Lee D Angew Chem Int Ed Engl. 2015 Apr 14. doi: 10.1002/anie.201500213. PMID:25873445<ref>PMID:25873445</ref>
-
Description: NMR solution structure of ligand-free OAA
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Lee, D]]
+
<div class="pdbe-citations 2mwh" style="background-color:#fffaf0;"></div>
-
[[Category: Ban, D]]
+
== References ==
-
[[Category: Sabo, T]]
+
<references/>
-
[[Category: Carneiro, M.G]]
+
__TOC__
-
[[Category: Mazur, A]]
+
</StructureSection>
-
[[Category: Koharudin, L.M]]
+
[[Category: Large Structures]]
-
[[Category: Gronenborn, A.M]]
+
[[Category: Planktothrix agardhii]]
-
[[Category: Trigo-Mourino, P]]
+
[[Category: Ban D]]
-
[[Category: Griesinger, C]]
+
[[Category: Carneiro MG]]
 +
[[Category: Griesinger C]]
 +
[[Category: Gronenborn AM]]
 +
[[Category: Koharudin LM]]
 +
[[Category: Lee D]]
 +
[[Category: Mazur A]]
 +
[[Category: Sabo T]]
 +
[[Category: Trigo-Mourino P]]

Current revision

NMR solution structure of ligand-free OAA

PDB ID 2mwh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools